Gene : Sobic.001G428400 S. bicolor v3.1.1
Defline:  (1 of 1) K12826 - splicing factor 3A subunit 2 (SF3A2, SAP62) Genomic Order:  4491
Name:  ? Sobic.001G428400 Secondary Identifier:  ? PAC:37937448
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G428400 0.5kb upstream 0.5kb upstream 3775 true Chr01: 70743050-70746824 Sorghum bicolor
Sobic.001G428400 0.5kb upstream 0.5kb upstream 500 false Chr01: 70743050-70743549 Sorghum bicolor
Sobic.001G428400 0.5kb downstream 0.5kb downstream 3775 true Chr01: 70743550-70747324 Sorghum bicolor
Sobic.001G428400 0.5kb downstream 0.5kb downstream 500 false Chr01: 70746825-70747324 Sorghum bicolor
Sobic.001G428400 1.0kb upstream 1.0kb upstream 4275 true Chr01: 70742550-70746824 Sorghum bicolor
Sobic.001G428400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70742550-70743549 Sorghum bicolor
Sobic.001G428400 1.0kb downstream 1.0kb downstream 4275 true Chr01: 70743550-70747824 Sorghum bicolor
Sobic.001G428400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 70746825-70747824 Sorghum bicolor
Sobic.001G428400 2.0kb upstream 2.0kb upstream 5275 true Chr01: 70741550-70746824 Sorghum bicolor
Sobic.001G428400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70741550-70743549 Sorghum bicolor
Sobic.001G428400 2.0kb downstream 2.0kb downstream 5275 true Chr01: 70743550-70748824 Sorghum bicolor
Sobic.001G428400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 70746825-70748824 Sorghum bicolor
Sobic.001G428400 5.0kb upstream 5.0kb upstream 8275 true Chr01: 70738550-70746824 Sorghum bicolor
Sobic.001G428400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70738550-70743549 Sorghum bicolor
Sobic.001G428400 5.0kb downstream 5.0kb downstream 8275 true Chr01: 70743550-70751824 Sorghum bicolor
Sobic.001G428400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 70746825-70751824 Sorghum bicolor
Sobic.001G428400 10.0kb upstream 10.0kb upstream 13275 true Chr01: 70733550-70746824 Sorghum bicolor
Sobic.001G428400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70733550-70743549 Sorghum bicolor
Sobic.001G428400 10.0kb downstream 10.0kb downstream 13275 true Chr01: 70743550-70756824 Sorghum bicolor
Sobic.001G428400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 70746825-70756824 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181159 5267 Panicoideae View MSA
124586979 5269 Grass View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.901     High High
cufflinks 2.584       Low
cufflinks 3.499       Low
cufflinks 5.085        
cufflinks 10.382        
cufflinks 6.807        
cufflinks 6.616        
cufflinks 3.252       Low
cufflinks 6.931        
cufflinks 6.91        
cufflinks 7.488        
cufflinks 7.93        
cufflinks 5.636        
cufflinks 7.329        
cufflinks 5.368        
cufflinks 3.09       Low
cufflinks 6.528        
cufflinks 6.805        
cufflinks 12.155     High High
cufflinks 6.289        
cufflinks 13.513       High
cufflinks 9.925        
cufflinks 7.24        
cufflinks 7.628        
cufflinks 4.933        
cufflinks 2.213       Low
cufflinks 6.284        
cufflinks 27.375     High High
cufflinks 5.358        
cufflinks 6.654        

0 Strain