Gene : Sobic.001G427500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11145 - TUMOR NECROSIS FACTOR-RELATED Genomic Order:  4482
Name:  ? Sobic.001G427500 Secondary Identifier:  ? PAC:37944379
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G427500 0.5kb upstream 0.5kb upstream 2430 true Chr01: 70670464-70672893 Sorghum bicolor
Sobic.001G427500 0.5kb upstream 0.5kb upstream 500 false Chr01: 70670464-70670963 Sorghum bicolor
Sobic.001G427500 0.5kb downstream 0.5kb downstream 2430 true Chr01: 70670964-70673393 Sorghum bicolor
Sobic.001G427500 0.5kb downstream 0.5kb downstream 500 false Chr01: 70672894-70673393 Sorghum bicolor
Sobic.001G427500 1.0kb upstream 1.0kb upstream 2930 true Chr01: 70669964-70672893 Sorghum bicolor
Sobic.001G427500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70669964-70670963 Sorghum bicolor
Sobic.001G427500 1.0kb downstream 1.0kb downstream 2930 true Chr01: 70670964-70673893 Sorghum bicolor
Sobic.001G427500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 70672894-70673893 Sorghum bicolor
Sobic.001G427500 2.0kb upstream 2.0kb upstream 3930 true Chr01: 70668964-70672893 Sorghum bicolor
Sobic.001G427500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70668964-70670963 Sorghum bicolor
Sobic.001G427500 2.0kb downstream 2.0kb downstream 3930 true Chr01: 70670964-70674893 Sorghum bicolor
Sobic.001G427500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 70672894-70674893 Sorghum bicolor
Sobic.001G427500 5.0kb upstream 5.0kb upstream 6930 true Chr01: 70665964-70672893 Sorghum bicolor
Sobic.001G427500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70665964-70670963 Sorghum bicolor
Sobic.001G427500 5.0kb downstream 5.0kb downstream 6930 true Chr01: 70670964-70677893 Sorghum bicolor
Sobic.001G427500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 70672894-70677893 Sorghum bicolor
Sobic.001G427500 10.0kb upstream 10.0kb upstream 11930 true Chr01: 70660964-70672893 Sorghum bicolor
Sobic.001G427500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70660964-70670963 Sorghum bicolor
Sobic.001G427500 10.0kb downstream 10.0kb downstream 11930 true Chr01: 70670964-70682893 Sorghum bicolor
Sobic.001G427500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 70672894-70682893 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175841 5267 Panicoideae View MSA
124572578 5269 Grass View MSA
122045372 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.699       High
cufflinks 0.857       Low
cufflinks 1.669       Low
cufflinks 3.115        
cufflinks 2.76        
cufflinks 3.659        
cufflinks 2.666        
cufflinks 1.627       Low
cufflinks 3.203        
cufflinks 3.271        
cufflinks 5.087       High
cufflinks 6.706       High
cufflinks 2.423        
cufflinks 7.322       High
cufflinks 2.018        
cufflinks 2.245        
cufflinks 2.616        
cufflinks 2.353        
cufflinks 2.862        
cufflinks 3.211        
cufflinks 3.658        
cufflinks 5.26       High
cufflinks 6.209       High
cufflinks 6.328       High
cufflinks 1.944        
cufflinks 1.043       Low
cufflinks 3.53        
cufflinks 1.708       Low
cufflinks 2.395        
cufflinks 2.425        

0 Strain