Gene : Sobic.001G544500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13428 - INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN Genomic Order:  5729
Name:  ? Sobic.001G544500 Secondary Identifier:  ? PAC:37938042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G544500 0.5kb upstream 0.5kb upstream 4271 true Chr01: 80871977-80876247 Sorghum bicolor
Sobic.001G544500 0.5kb upstream 0.5kb upstream 500 false Chr01: 80871977-80872476 Sorghum bicolor
Sobic.001G544500 0.5kb downstream 0.5kb downstream 4271 true Chr01: 80872477-80876747 Sorghum bicolor
Sobic.001G544500 0.5kb downstream 0.5kb downstream 500 false Chr01: 80876248-80876747 Sorghum bicolor
Sobic.001G544500 1.0kb upstream 1.0kb upstream 4771 true Chr01: 80871477-80876247 Sorghum bicolor
Sobic.001G544500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 80871477-80872476 Sorghum bicolor
Sobic.001G544500 1.0kb downstream 1.0kb downstream 4771 true Chr01: 80872477-80877247 Sorghum bicolor
Sobic.001G544500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 80876248-80877247 Sorghum bicolor
Sobic.001G544500 2.0kb upstream 2.0kb upstream 5771 true Chr01: 80870477-80876247 Sorghum bicolor
Sobic.001G544500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 80870477-80872476 Sorghum bicolor
Sobic.001G544500 2.0kb downstream 2.0kb downstream 5771 true Chr01: 80872477-80878247 Sorghum bicolor
Sobic.001G544500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 80876248-80878247 Sorghum bicolor
Sobic.001G544500 5.0kb upstream 5.0kb upstream 8771 true Chr01: 80867477-80876247 Sorghum bicolor
Sobic.001G544500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 80867477-80872476 Sorghum bicolor
Sobic.001G544500 5.0kb downstream 5.0kb downstream 8771 true Chr01: 80872477-80881247 Sorghum bicolor
Sobic.001G544500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 80876248-80881247 Sorghum bicolor
Sobic.001G544500 10.0kb upstream 10.0kb upstream 13771 true Chr01: 80862477-80876247 Sorghum bicolor
Sobic.001G544500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 80862477-80872476 Sorghum bicolor
Sobic.001G544500 10.0kb downstream 10.0kb downstream 11916 true Chr01: 80872477-80884392 Sorghum bicolor
Sobic.001G544500 10.0kb downstream 10.0kb downstream 8145 false Chr01: 80876248-80884392 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191849 5267 Panicoideae View MSA
124575474 5269 Grass View MSA
122043959 5273 Angiosperm View MSA
121347546 5274 Embryophyte View MSA
123380568 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.502        
cufflinks 0.826       Low
cufflinks 2.92        
cufflinks 5.456        
cufflinks 5.579        
cufflinks 6.426       High
cufflinks 3.156        
cufflinks 1.521       Low
cufflinks 7.289       High
cufflinks 7.181       High
cufflinks 2.991        
cufflinks 4.578        
cufflinks 5.099        
cufflinks 3.38        
cufflinks 4.814        
cufflinks 1.902       Low
cufflinks 2.966        
cufflinks 3.178        
cufflinks 3.192        
cufflinks 4.146        
cufflinks 8.308       High
cufflinks 3.286        
cufflinks 3.513        
cufflinks 3.488        
cufflinks 1.413       Low
cufflinks 0.782       Low
cufflinks 4.85        
cufflinks 3.923        
cufflinks 2.44        
cufflinks 5.083        

0 Strain