Gene : Sobic.002G003300 S. bicolor v3.1.1
Defline:  (1 of 2) K10884 - ATP-dependent DNA helicase 2 subunit 1 (XRCC6, KU70, G22P1) Genomic Order:  33
Name:  ? Sobic.002G003300 Secondary Identifier:  ? PAC:37949739
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G003300 0.5kb upstream 0.5kb upstream 10567 true Chr02: 433375-443941 Sorghum bicolor
Sobic.002G003300 0.5kb upstream 0.5kb upstream 500 false Chr02: 443442-443941 Sorghum bicolor
Sobic.002G003300 0.5kb downstream 0.5kb downstream 10567 true Chr02: 432875-443441 Sorghum bicolor
Sobic.002G003300 0.5kb downstream 0.5kb downstream 500 false Chr02: 432875-433374 Sorghum bicolor
Sobic.002G003300 1.0kb upstream 1.0kb upstream 11067 true Chr02: 433375-444441 Sorghum bicolor
Sobic.002G003300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 443442-444441 Sorghum bicolor
Sobic.002G003300 1.0kb downstream 1.0kb downstream 11067 true Chr02: 432375-443441 Sorghum bicolor
Sobic.002G003300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 432375-433374 Sorghum bicolor
Sobic.002G003300 2.0kb upstream 2.0kb upstream 12067 true Chr02: 433375-445441 Sorghum bicolor
Sobic.002G003300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 443442-445441 Sorghum bicolor
Sobic.002G003300 2.0kb downstream 2.0kb downstream 12067 true Chr02: 431375-443441 Sorghum bicolor
Sobic.002G003300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 431375-433374 Sorghum bicolor
Sobic.002G003300 5.0kb upstream 5.0kb upstream 15067 true Chr02: 433375-448441 Sorghum bicolor
Sobic.002G003300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 443442-448441 Sorghum bicolor
Sobic.002G003300 5.0kb downstream 5.0kb downstream 15067 true Chr02: 428375-443441 Sorghum bicolor
Sobic.002G003300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 428375-433374 Sorghum bicolor
Sobic.002G003300 10.0kb upstream 10.0kb upstream 20067 true Chr02: 433375-453441 Sorghum bicolor
Sobic.002G003300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 443442-453441 Sorghum bicolor
Sobic.002G003300 10.0kb downstream 10.0kb downstream 20067 true Chr02: 423375-443441 Sorghum bicolor
Sobic.002G003300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 423375-433374 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192321 5267 Panicoideae View MSA
124580278 5269 Grass View MSA
122048334 5273 Angiosperm View MSA
121348405 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.375        
cufflinks 0.026     Low Low
cufflinks 0.125        
cufflinks 0.288        
cufflinks 0.822       High
cufflinks 0.227        
cufflinks 0.291        
cufflinks 0.049     Low Low
cufflinks 0.723        
cufflinks 0.691        
cufflinks 0.413        
cufflinks 0.319        
cufflinks 0.308        
cufflinks 0.289        
cufflinks 0.406        
cufflinks 0.088       Low
cufflinks 0.26        
cufflinks 0.352        
cufflinks 0.086     Low Low
cufflinks 0.227        
cufflinks 1.572       High
cufflinks 0.437        
cufflinks 0.397        
cufflinks 0.433        
cufflinks 0.059       Low
cufflinks 0.018     Low Low
cufflinks 0.438        
cufflinks 0.344        
cufflinks 0.209        
cufflinks 0.589        

0 Strain