Gene : Sobic.001G543100 S. bicolor v3.1.1
Defline:  (1 of 44) PTHR10799 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  5715
Name:  ? Sobic.001G543100 Secondary Identifier:  ? PAC:37939590
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G543100 0.5kb upstream 0.5kb upstream 23356 true Chr01: 80675817-80699172 Sorghum bicolor
Sobic.001G543100 0.5kb upstream 0.5kb upstream 500 false Chr01: 80698673-80699172 Sorghum bicolor
Sobic.001G543100 0.5kb downstream 0.5kb downstream 23356 true Chr01: 80675317-80698672 Sorghum bicolor
Sobic.001G543100 0.5kb downstream 0.5kb downstream 500 false Chr01: 80675317-80675816 Sorghum bicolor
Sobic.001G543100 1.0kb upstream 1.0kb upstream 23856 true Chr01: 80675817-80699672 Sorghum bicolor
Sobic.001G543100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 80698673-80699672 Sorghum bicolor
Sobic.001G543100 1.0kb downstream 1.0kb downstream 23856 true Chr01: 80674817-80698672 Sorghum bicolor
Sobic.001G543100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 80674817-80675816 Sorghum bicolor
Sobic.001G543100 2.0kb upstream 2.0kb upstream 24856 true Chr01: 80675817-80700672 Sorghum bicolor
Sobic.001G543100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 80698673-80700672 Sorghum bicolor
Sobic.001G543100 2.0kb downstream 2.0kb downstream 24856 true Chr01: 80673817-80698672 Sorghum bicolor
Sobic.001G543100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 80673817-80675816 Sorghum bicolor
Sobic.001G543100 5.0kb upstream 5.0kb upstream 27856 true Chr01: 80675817-80703672 Sorghum bicolor
Sobic.001G543100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 80698673-80703672 Sorghum bicolor
Sobic.001G543100 5.0kb downstream 5.0kb downstream 27856 true Chr01: 80670817-80698672 Sorghum bicolor
Sobic.001G543100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 80670817-80675816 Sorghum bicolor
Sobic.001G543100 10.0kb upstream 10.0kb upstream 32856 true Chr01: 80675817-80708672 Sorghum bicolor
Sobic.001G543100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 80698673-80708672 Sorghum bicolor
Sobic.001G543100 10.0kb downstream 10.0kb downstream 32856 true Chr01: 80665817-80698672 Sorghum bicolor
Sobic.001G543100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 80665817-80675816 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026277 5273 Angiosperm View MSA
122182460 5267 Panicoideae View MSA
124570567 5269 Grass View MSA
121347907 5274 Embryophyte View MSA
123380672 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018     Low  
cufflinks 0.003     Low Low
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.04     Low High
cufflinks 0.004     Low  
cufflinks 0.011     Low  
cufflinks 0.002     Low Low
cufflinks 0.01     Low  
cufflinks 0.013     Low  
cufflinks 0.015     Low  
cufflinks 0.017     Low  
cufflinks 0.01     Low  
cufflinks 0.015     Low  
cufflinks 0.011     Low  
cufflinks 0.002     Low Low
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 0.001     Low Low
cufflinks 0.011     Low  
cufflinks 0.063     Low High
cufflinks 0.015     Low  
cufflinks 0.015     Low  
cufflinks 0.015     Low  
cufflinks 0.003     Low Low
cufflinks 0.002     Low Low
cufflinks 0.015     Low  
cufflinks 0.038     Low High
cufflinks 0.006     Low  
cufflinks 0.013     Low  

0 Strain