Gene : Sobic.005G229100 S. bicolor v3.1.1
Defline:  (1 of 61) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  2404
Name:  ? Sobic.005G229100 Secondary Identifier:  ? PAC:37925145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G229100 0.5kb upstream 0.5kb upstream 4219 true Chr05: 71626908-71631126 Sorghum bicolor
Sobic.005G229100 0.5kb upstream 0.5kb upstream 500 false Chr05: 71626908-71627407 Sorghum bicolor
Sobic.005G229100 0.5kb downstream 0.5kb downstream 4219 true Chr05: 71627408-71631626 Sorghum bicolor
Sobic.005G229100 0.5kb downstream 0.5kb downstream 500 false Chr05: 71631127-71631626 Sorghum bicolor
Sobic.005G229100 1.0kb upstream 1.0kb upstream 4719 true Chr05: 71626408-71631126 Sorghum bicolor
Sobic.005G229100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 71626408-71627407 Sorghum bicolor
Sobic.005G229100 1.0kb downstream 1.0kb downstream 4719 true Chr05: 71627408-71632126 Sorghum bicolor
Sobic.005G229100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 71631127-71632126 Sorghum bicolor
Sobic.005G229100 2.0kb upstream 2.0kb upstream 5719 true Chr05: 71625408-71631126 Sorghum bicolor
Sobic.005G229100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 71625408-71627407 Sorghum bicolor
Sobic.005G229100 2.0kb downstream 2.0kb downstream 5719 true Chr05: 71627408-71633126 Sorghum bicolor
Sobic.005G229100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 71631127-71633126 Sorghum bicolor
Sobic.005G229100 5.0kb upstream 5.0kb upstream 8719 true Chr05: 71622408-71631126 Sorghum bicolor
Sobic.005G229100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 71622408-71627407 Sorghum bicolor
Sobic.005G229100 5.0kb downstream 5.0kb downstream 8719 true Chr05: 71627408-71636126 Sorghum bicolor
Sobic.005G229100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 71631127-71636126 Sorghum bicolor
Sobic.005G229100 10.0kb upstream 10.0kb upstream 13719 true Chr05: 71617408-71631126 Sorghum bicolor
Sobic.005G229100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 71617408-71627407 Sorghum bicolor
Sobic.005G229100 10.0kb downstream 10.0kb downstream 13719 true Chr05: 71627408-71641126 Sorghum bicolor
Sobic.005G229100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 71631127-71641126 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185739 5267 Panicoideae View MSA
124586216 5269 Grass View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.136        
cufflinks 0.071     Low  
cufflinks 1.013        
cufflinks 1.125        
cufflinks 0.1        
cufflinks 0.01     Low Low
cufflinks 3.215        
cufflinks 2.849        
cufflinks 6.934       High
cufflinks 2.483        
cufflinks 0.228        
cufflinks 0.027     Low Low
cufflinks 0.744        
cufflinks 0.838        
cufflinks 0.918        
cufflinks 0.939        
cufflinks 0.007     Low Low
cufflinks 1.691        
cufflinks 1.575        
cufflinks 1.635        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 1.143        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.76        
cufflinks 0.06     Low  

0 Strain