Gene : Sobic.005G229500 S. bicolor v3.1.1
Defline:  (1 of 81) PF03514 - GRAS domain family (GRAS) Genomic Order:  2409
Name:  ? Sobic.005G229500 Secondary Identifier:  ? PAC:37925962
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G229500 0.5kb upstream 0.5kb upstream 3665 true Chr05: 71657439-71661103 Sorghum bicolor
Sobic.005G229500 0.5kb upstream 0.5kb upstream 500 false Chr05: 71657439-71657938 Sorghum bicolor
Sobic.005G229500 0.5kb downstream 0.5kb downstream 3665 true Chr05: 71657939-71661603 Sorghum bicolor
Sobic.005G229500 0.5kb downstream 0.5kb downstream 500 false Chr05: 71661104-71661603 Sorghum bicolor
Sobic.005G229500 1.0kb upstream 1.0kb upstream 4165 true Chr05: 71656939-71661103 Sorghum bicolor
Sobic.005G229500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 71656939-71657938 Sorghum bicolor
Sobic.005G229500 1.0kb downstream 1.0kb downstream 4165 true Chr05: 71657939-71662103 Sorghum bicolor
Sobic.005G229500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 71661104-71662103 Sorghum bicolor
Sobic.005G229500 2.0kb upstream 2.0kb upstream 5165 true Chr05: 71655939-71661103 Sorghum bicolor
Sobic.005G229500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 71655939-71657938 Sorghum bicolor
Sobic.005G229500 2.0kb downstream 2.0kb downstream 5165 true Chr05: 71657939-71663103 Sorghum bicolor
Sobic.005G229500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 71661104-71663103 Sorghum bicolor
Sobic.005G229500 5.0kb upstream 5.0kb upstream 8165 true Chr05: 71652939-71661103 Sorghum bicolor
Sobic.005G229500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 71652939-71657938 Sorghum bicolor
Sobic.005G229500 5.0kb downstream 5.0kb downstream 8165 true Chr05: 71657939-71666103 Sorghum bicolor
Sobic.005G229500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 71661104-71666103 Sorghum bicolor
Sobic.005G229500 10.0kb upstream 10.0kb upstream 13165 true Chr05: 71647939-71661103 Sorghum bicolor
Sobic.005G229500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 71647939-71657938 Sorghum bicolor
Sobic.005G229500 10.0kb downstream 10.0kb downstream 13165 true Chr05: 71657939-71671103 Sorghum bicolor
Sobic.005G229500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 71661104-71671103 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192990 5267 Panicoideae View MSA
124588326 5269 Grass View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.172       High
cufflinks 0.822       Low
cufflinks 1.439       Low
cufflinks 2.072        
cufflinks 2.802        
cufflinks 3.45        
cufflinks 2.493        
cufflinks 1.174       Low
cufflinks 5.692       High
cufflinks 4.823        
cufflinks 4.475        
cufflinks 7.76       High
cufflinks 2.407        
cufflinks 6.98       High
cufflinks 2.633        
cufflinks 3.098        
cufflinks 2.345        
cufflinks 2.529        
cufflinks 1.595       Low
cufflinks 3.273        
cufflinks 5.21       High
cufflinks 3.601        
cufflinks 4.923        
cufflinks 4.974        
cufflinks 1.418       Low
cufflinks 0.923       Low
cufflinks 3.085        
cufflinks 7.615       High
cufflinks 1.944        
cufflinks 2.795        

0 Strain