Gene : Sobic.001G539600 S. bicolor v3.1.1
Defline:  (1 of 76) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  5675
Name:  ? Sobic.001G539600 Secondary Identifier:  ? PAC:37940665
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G539600 0.5kb upstream 0.5kb upstream 1301 true Chr01: 80240203-80241503 Sorghum bicolor
Sobic.001G539600 0.5kb upstream 0.5kb upstream 500 false Chr01: 80240203-80240702 Sorghum bicolor
Sobic.001G539600 0.5kb downstream 0.5kb downstream 1301 true Chr01: 80240703-80242003 Sorghum bicolor
Sobic.001G539600 0.5kb downstream 0.5kb downstream 500 false Chr01: 80241504-80242003 Sorghum bicolor
Sobic.001G539600 1.0kb upstream 1.0kb upstream 1801 true Chr01: 80239703-80241503 Sorghum bicolor
Sobic.001G539600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 80239703-80240702 Sorghum bicolor
Sobic.001G539600 1.0kb downstream 1.0kb downstream 1801 true Chr01: 80240703-80242503 Sorghum bicolor
Sobic.001G539600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 80241504-80242503 Sorghum bicolor
Sobic.001G539600 2.0kb upstream 2.0kb upstream 2801 true Chr01: 80238703-80241503 Sorghum bicolor
Sobic.001G539600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 80238703-80240702 Sorghum bicolor
Sobic.001G539600 2.0kb downstream 2.0kb downstream 2801 true Chr01: 80240703-80243503 Sorghum bicolor
Sobic.001G539600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 80241504-80243503 Sorghum bicolor
Sobic.001G539600 5.0kb upstream 5.0kb upstream 5801 true Chr01: 80235703-80241503 Sorghum bicolor
Sobic.001G539600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 80235703-80240702 Sorghum bicolor
Sobic.001G539600 5.0kb downstream 5.0kb downstream 5801 true Chr01: 80240703-80246503 Sorghum bicolor
Sobic.001G539600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 80241504-80246503 Sorghum bicolor
Sobic.001G539600 10.0kb upstream 10.0kb upstream 10801 true Chr01: 80230703-80241503 Sorghum bicolor
Sobic.001G539600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 80230703-80240702 Sorghum bicolor
Sobic.001G539600 10.0kb downstream 10.0kb downstream 10801 true Chr01: 80240703-80251503 Sorghum bicolor
Sobic.001G539600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 80241504-80251503 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994907 5273 Angiosperm View MSA
122182056 5267 Panicoideae View MSA
124586067 5269 Grass View MSA
121265116 5274 Embryophyte View MSA
123303521 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 354.998     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.064        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.018        

0 Strain