Gene : Sobic.001G537600 S. bicolor v3.1.1
Defline:  similar to Os03g0108700 protein Genomic Order:  5653
Name:  ? Sobic.001G537600 Secondary Identifier:  ? PAC:37938832
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G537600 0.5kb upstream 0.5kb upstream 6757 true Chr01: 80056643-80063399 Sorghum bicolor
Sobic.001G537600 0.5kb upstream 0.5kb upstream 500 false Chr01: 80056643-80057142 Sorghum bicolor
Sobic.001G537600 0.5kb downstream 0.5kb downstream 6757 true Chr01: 80057143-80063899 Sorghum bicolor
Sobic.001G537600 0.5kb downstream 0.5kb downstream 500 false Chr01: 80063400-80063899 Sorghum bicolor
Sobic.001G537600 1.0kb upstream 1.0kb upstream 7257 true Chr01: 80056143-80063399 Sorghum bicolor
Sobic.001G537600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 80056143-80057142 Sorghum bicolor
Sobic.001G537600 1.0kb downstream 1.0kb downstream 7257 true Chr01: 80057143-80064399 Sorghum bicolor
Sobic.001G537600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 80063400-80064399 Sorghum bicolor
Sobic.001G537600 2.0kb upstream 2.0kb upstream 8257 true Chr01: 80055143-80063399 Sorghum bicolor
Sobic.001G537600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 80055143-80057142 Sorghum bicolor
Sobic.001G537600 2.0kb downstream 2.0kb downstream 8257 true Chr01: 80057143-80065399 Sorghum bicolor
Sobic.001G537600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 80063400-80065399 Sorghum bicolor
Sobic.001G537600 5.0kb upstream 5.0kb upstream 11257 true Chr01: 80052143-80063399 Sorghum bicolor
Sobic.001G537600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 80052143-80057142 Sorghum bicolor
Sobic.001G537600 5.0kb downstream 5.0kb downstream 11257 true Chr01: 80057143-80068399 Sorghum bicolor
Sobic.001G537600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 80063400-80068399 Sorghum bicolor
Sobic.001G537600 10.0kb upstream 10.0kb upstream 16257 true Chr01: 80047143-80063399 Sorghum bicolor
Sobic.001G537600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 80047143-80057142 Sorghum bicolor
Sobic.001G537600 10.0kb downstream 10.0kb downstream 16257 true Chr01: 80057143-80073399 Sorghum bicolor
Sobic.001G537600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 80063400-80073399 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180819 5267 Panicoideae View MSA
124578490 5269 Grass View MSA
122047325 5273 Angiosperm View MSA
121347888 5274 Embryophyte View MSA
123380666 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.092        
cufflinks 0.009     Low  
cufflinks 0.027     Low  
cufflinks 0.04     Low  
cufflinks 0.002     Low Low
cufflinks 0.07     Low  
cufflinks 0.023     Low  
cufflinks 0.001     Low Low
cufflinks 0.019     Low  
cufflinks 0.059     Low  
cufflinks 0.061     Low  
cufflinks 0.055     Low  
cufflinks 0.016     Low  
cufflinks 0.078     Low  
cufflinks 0.221       High
cufflinks 0.037     Low  
cufflinks 0.02     Low  
cufflinks 0.035     Low  
cufflinks 0.005     Low Low
cufflinks 0.02     Low  
cufflinks 0.021     Low  
cufflinks 0.086     Low  
cufflinks 0.068     Low  
cufflinks 0.06     Low  
cufflinks 0.02     Low  
cufflinks 0.009     Low  
cufflinks 0.091     Low  
cufflinks 0.054     Low  
cufflinks 0.064     Low  
cufflinks 0.722       High

0 Strain