Gene : Sobic.001G537001 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR33650:SF1 - CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN Genomic Order:  5647
Name:  ? Sobic.001G537001 Secondary Identifier:  ? PAC:37945134
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G537001 0.5kb upstream 0.5kb upstream 4479 true Chr01: 80000915-80005393 Sorghum bicolor
Sobic.001G537001 0.5kb upstream 0.5kb upstream 500 false Chr01: 80000915-80001414 Sorghum bicolor
Sobic.001G537001 0.5kb downstream 0.5kb downstream 4479 true Chr01: 80001415-80005893 Sorghum bicolor
Sobic.001G537001 0.5kb downstream 0.5kb downstream 500 false Chr01: 80005394-80005893 Sorghum bicolor
Sobic.001G537001 1.0kb upstream 1.0kb upstream 4979 true Chr01: 80000415-80005393 Sorghum bicolor
Sobic.001G537001 1.0kb upstream 1.0kb upstream 1000 false Chr01: 80000415-80001414 Sorghum bicolor
Sobic.001G537001 1.0kb downstream 1.0kb downstream 4979 true Chr01: 80001415-80006393 Sorghum bicolor
Sobic.001G537001 1.0kb downstream 1.0kb downstream 1000 false Chr01: 80005394-80006393 Sorghum bicolor
Sobic.001G537001 2.0kb upstream 2.0kb upstream 5979 true Chr01: 79999415-80005393 Sorghum bicolor
Sobic.001G537001 2.0kb upstream 2.0kb upstream 2000 false Chr01: 79999415-80001414 Sorghum bicolor
Sobic.001G537001 2.0kb downstream 2.0kb downstream 5979 true Chr01: 80001415-80007393 Sorghum bicolor
Sobic.001G537001 2.0kb downstream 2.0kb downstream 2000 false Chr01: 80005394-80007393 Sorghum bicolor
Sobic.001G537001 5.0kb upstream 5.0kb upstream 8979 true Chr01: 79996415-80005393 Sorghum bicolor
Sobic.001G537001 5.0kb upstream 5.0kb upstream 5000 false Chr01: 79996415-80001414 Sorghum bicolor
Sobic.001G537001 5.0kb downstream 5.0kb downstream 8979 true Chr01: 80001415-80010393 Sorghum bicolor
Sobic.001G537001 5.0kb downstream 5.0kb downstream 5000 false Chr01: 80005394-80010393 Sorghum bicolor
Sobic.001G537001 10.0kb upstream 10.0kb upstream 13979 true Chr01: 79991415-80005393 Sorghum bicolor
Sobic.001G537001 10.0kb upstream 10.0kb upstream 10000 false Chr01: 79991415-80001414 Sorghum bicolor
Sobic.001G537001 10.0kb downstream 10.0kb downstream 13979 true Chr01: 80001415-80015393 Sorghum bicolor
Sobic.001G537001 10.0kb downstream 10.0kb downstream 10000 false Chr01: 80005394-80015393 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189690 5267 Panicoideae View MSA
124570581 5269 Grass View MSA
122044615 5273 Angiosperm View MSA
121350431 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.706        
cufflinks 1.228       Low
cufflinks 3.433        
cufflinks 2.119        
cufflinks 3.526        
cufflinks 3.226        
cufflinks 3.124        
cufflinks 2.374        
cufflinks 4.373       High
cufflinks 4.516       High
cufflinks 0.806       Low
cufflinks 1.453       Low
cufflinks 3.765       High
cufflinks 1.355       Low
cufflinks 3.906       High
cufflinks 1.89        
cufflinks 2.908        
cufflinks 3.271        
cufflinks 2.674        
cufflinks 2.507        
cufflinks 3.597        
cufflinks 1.055       Low
cufflinks 1.485        
cufflinks 1.629        
cufflinks 1.681        
cufflinks 1.686        
cufflinks 1.982        
cufflinks 1.345       Low
cufflinks 5.03       High
cufflinks 5.389       High

0 Strain