Gene : Sobic.001G533300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR15371//PTHR15371:SF6 - TIM23 // SUBFAMILY NOT NAMED Genomic Order:  5606
Name:  ? Sobic.001G533300 Secondary Identifier:  ? PAC:37942241
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G533300 0.5kb upstream 0.5kb upstream 3353 true Chr01: 79651905-79655257 Sorghum bicolor
Sobic.001G533300 0.5kb upstream 0.5kb upstream 500 false Chr01: 79651905-79652404 Sorghum bicolor
Sobic.001G533300 0.5kb downstream 0.5kb downstream 3353 true Chr01: 79652405-79655757 Sorghum bicolor
Sobic.001G533300 0.5kb downstream 0.5kb downstream 500 false Chr01: 79655258-79655757 Sorghum bicolor
Sobic.001G533300 1.0kb upstream 1.0kb upstream 3853 true Chr01: 79651405-79655257 Sorghum bicolor
Sobic.001G533300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 79651405-79652404 Sorghum bicolor
Sobic.001G533300 1.0kb downstream 1.0kb downstream 3853 true Chr01: 79652405-79656257 Sorghum bicolor
Sobic.001G533300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 79655258-79656257 Sorghum bicolor
Sobic.001G533300 2.0kb upstream 2.0kb upstream 4853 true Chr01: 79650405-79655257 Sorghum bicolor
Sobic.001G533300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 79650405-79652404 Sorghum bicolor
Sobic.001G533300 2.0kb downstream 2.0kb downstream 4853 true Chr01: 79652405-79657257 Sorghum bicolor
Sobic.001G533300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 79655258-79657257 Sorghum bicolor
Sobic.001G533300 5.0kb upstream 5.0kb upstream 7853 true Chr01: 79647405-79655257 Sorghum bicolor
Sobic.001G533300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 79647405-79652404 Sorghum bicolor
Sobic.001G533300 5.0kb downstream 5.0kb downstream 7853 true Chr01: 79652405-79660257 Sorghum bicolor
Sobic.001G533300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 79655258-79660257 Sorghum bicolor
Sobic.001G533300 10.0kb upstream 10.0kb upstream 12853 true Chr01: 79642405-79655257 Sorghum bicolor
Sobic.001G533300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 79642405-79652404 Sorghum bicolor
Sobic.001G533300 10.0kb downstream 10.0kb downstream 12853 true Chr01: 79652405-79665257 Sorghum bicolor
Sobic.001G533300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 79655258-79665257 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187559 5267 Panicoideae View MSA
124586369 5269 Grass View MSA
122045727 5273 Angiosperm View MSA
121349022 5274 Embryophyte View MSA
123425450 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.779     High High
cufflinks 5.002        
cufflinks 3.841        
cufflinks 7.857       High
cufflinks 2.763        
cufflinks 7.881       High
cufflinks 2.046       Low
cufflinks 2.416        
cufflinks 3.029        
cufflinks 3.317        
cufflinks 4.305        
cufflinks 2.635        
cufflinks 3.352        
cufflinks 3.9        
cufflinks 3.691        
cufflinks 2.672        
cufflinks 2.817        
cufflinks 2.293        
cufflinks 2.984        
cufflinks 2.705        
cufflinks 1.982       Low
cufflinks 5.576        
cufflinks 4.252        
cufflinks 3.808        
cufflinks 5.738        
cufflinks 3.595        
cufflinks 3.446        
cufflinks 18.652     High High
cufflinks 2.049       Low
cufflinks 3.434        

0 Strain