Gene : Sobic.001G528800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10926//PTHR10926:SF26 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Genomic Order:  5559
Name:  ? Sobic.001G528800 Secondary Identifier:  ? PAC:37943050
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G528800 0.5kb upstream 0.5kb upstream 3417 true Chr01: 79283137-79286553 Sorghum bicolor
Sobic.001G528800 0.5kb upstream 0.5kb upstream 500 false Chr01: 79283137-79283636 Sorghum bicolor
Sobic.001G528800 0.5kb downstream 0.5kb downstream 3417 true Chr01: 79283637-79287053 Sorghum bicolor
Sobic.001G528800 0.5kb downstream 0.5kb downstream 500 false Chr01: 79286554-79287053 Sorghum bicolor
Sobic.001G528800 1.0kb upstream 1.0kb upstream 3917 true Chr01: 79282637-79286553 Sorghum bicolor
Sobic.001G528800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 79282637-79283636 Sorghum bicolor
Sobic.001G528800 1.0kb downstream 1.0kb downstream 3917 true Chr01: 79283637-79287553 Sorghum bicolor
Sobic.001G528800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 79286554-79287553 Sorghum bicolor
Sobic.001G528800 2.0kb upstream 2.0kb upstream 4917 true Chr01: 79281637-79286553 Sorghum bicolor
Sobic.001G528800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 79281637-79283636 Sorghum bicolor
Sobic.001G528800 2.0kb downstream 2.0kb downstream 4917 true Chr01: 79283637-79288553 Sorghum bicolor
Sobic.001G528800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 79286554-79288553 Sorghum bicolor
Sobic.001G528800 5.0kb upstream 5.0kb upstream 7917 true Chr01: 79278637-79286553 Sorghum bicolor
Sobic.001G528800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 79278637-79283636 Sorghum bicolor
Sobic.001G528800 5.0kb downstream 5.0kb downstream 7917 true Chr01: 79283637-79291553 Sorghum bicolor
Sobic.001G528800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 79286554-79291553 Sorghum bicolor
Sobic.001G528800 10.0kb upstream 10.0kb upstream 12917 true Chr01: 79273637-79286553 Sorghum bicolor
Sobic.001G528800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 79273637-79283636 Sorghum bicolor
Sobic.001G528800 10.0kb downstream 10.0kb downstream 12917 true Chr01: 79283637-79296553 Sorghum bicolor
Sobic.001G528800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 79286554-79296553 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194856 5267 Panicoideae View MSA
124573389 5269 Grass View MSA
122050302 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.101        
cufflinks 5.47       High
cufflinks 3.343        
cufflinks 2.109        
cufflinks 2.811        
cufflinks 1.465        
cufflinks 2.148        
cufflinks 2.201        
cufflinks 2.848        
cufflinks 3.564        
cufflinks 0.912        
cufflinks 0.653        
cufflinks 4.042       High
cufflinks 0.543       Low
cufflinks 3.983       High
cufflinks 4.659       High
cufflinks 2.183        
cufflinks 2.332        
cufflinks 3.484        
cufflinks 2.735        
cufflinks 1.975        
cufflinks 0.479       Low
cufflinks 0.57        
cufflinks 0.462       Low
cufflinks 5.834       High
cufflinks 4.513       High
cufflinks 0.464       Low
cufflinks 0.336       Low
cufflinks 1.465        
cufflinks 3.583        

0 Strain