Gene : Sobic.001G529200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31989//PTHR31989:SF6 - FAMILY NOT NAMED // F12P19.8 PROTEIN Genomic Order:  5563
Name:  ? Sobic.001G529200 Secondary Identifier:  ? PAC:37942575
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G529200 0.5kb upstream 0.5kb upstream 7704 true Chr01: 79301272-79308975 Sorghum bicolor
Sobic.001G529200 0.5kb upstream 0.5kb upstream 500 false Chr01: 79308476-79308975 Sorghum bicolor
Sobic.001G529200 0.5kb downstream 0.5kb downstream 7704 true Chr01: 79300772-79308475 Sorghum bicolor
Sobic.001G529200 0.5kb downstream 0.5kb downstream 500 false Chr01: 79300772-79301271 Sorghum bicolor
Sobic.001G529200 1.0kb upstream 1.0kb upstream 8204 true Chr01: 79301272-79309475 Sorghum bicolor
Sobic.001G529200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 79308476-79309475 Sorghum bicolor
Sobic.001G529200 1.0kb downstream 1.0kb downstream 8204 true Chr01: 79300272-79308475 Sorghum bicolor
Sobic.001G529200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 79300272-79301271 Sorghum bicolor
Sobic.001G529200 2.0kb upstream 2.0kb upstream 9204 true Chr01: 79301272-79310475 Sorghum bicolor
Sobic.001G529200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 79308476-79310475 Sorghum bicolor
Sobic.001G529200 2.0kb downstream 2.0kb downstream 9204 true Chr01: 79299272-79308475 Sorghum bicolor
Sobic.001G529200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 79299272-79301271 Sorghum bicolor
Sobic.001G529200 5.0kb upstream 5.0kb upstream 12204 true Chr01: 79301272-79313475 Sorghum bicolor
Sobic.001G529200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 79308476-79313475 Sorghum bicolor
Sobic.001G529200 5.0kb downstream 5.0kb downstream 12204 true Chr01: 79296272-79308475 Sorghum bicolor
Sobic.001G529200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 79296272-79301271 Sorghum bicolor
Sobic.001G529200 10.0kb upstream 10.0kb upstream 17204 true Chr01: 79301272-79318475 Sorghum bicolor
Sobic.001G529200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 79308476-79318475 Sorghum bicolor
Sobic.001G529200 10.0kb downstream 10.0kb downstream 17204 true Chr01: 79291272-79308475 Sorghum bicolor
Sobic.001G529200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 79291272-79301271 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180907 5267 Panicoideae View MSA
124578992 5269 Grass View MSA
122045532 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.451        
cufflinks 0.014     Low Low
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.642        
cufflinks 0.003     Low Low
cufflinks 1.989        
cufflinks 1.181        
cufflinks 0.022     Low Low
cufflinks 0.296        
cufflinks 2.621        
cufflinks 1.115        
cufflinks 0.452        
cufflinks 1.698        
cufflinks 0.314        
cufflinks 0.009     Low Low
cufflinks 1.888        
cufflinks 1.851        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.088        
cufflinks 1.071        
cufflinks 0.398        
cufflinks 1.307        
cufflinks 1.119        
cufflinks 0.021     Low Low
cufflinks 0.024     Low Low
cufflinks 0.585        
cufflinks 0.177        
cufflinks 2.99       High
cufflinks 0.288        

0 Strain