Gene : Sobic.006G002700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13377//PTHR13377:SF5 - PLACENTAL PROTEIN 6 // SUBFAMILY NOT NAMED Genomic Order:  25
Name:  ? Sobic.006G002700 Secondary Identifier:  ? PAC:37948794
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G002700 0.5kb upstream 0.5kb upstream 4750 true Chr06: 460537-465286 Sorghum bicolor
Sobic.006G002700 0.5kb upstream 0.5kb upstream 500 false Chr06: 464787-465286 Sorghum bicolor
Sobic.006G002700 0.5kb downstream 0.5kb downstream 4750 true Chr06: 460037-464786 Sorghum bicolor
Sobic.006G002700 0.5kb downstream 0.5kb downstream 500 false Chr06: 460037-460536 Sorghum bicolor
Sobic.006G002700 1.0kb upstream 1.0kb upstream 5250 true Chr06: 460537-465786 Sorghum bicolor
Sobic.006G002700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 464787-465786 Sorghum bicolor
Sobic.006G002700 1.0kb downstream 1.0kb downstream 5250 true Chr06: 459537-464786 Sorghum bicolor
Sobic.006G002700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 459537-460536 Sorghum bicolor
Sobic.006G002700 2.0kb upstream 2.0kb upstream 6250 true Chr06: 460537-466786 Sorghum bicolor
Sobic.006G002700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 464787-466786 Sorghum bicolor
Sobic.006G002700 2.0kb downstream 2.0kb downstream 6250 true Chr06: 458537-464786 Sorghum bicolor
Sobic.006G002700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 458537-460536 Sorghum bicolor
Sobic.006G002700 5.0kb upstream 5.0kb upstream 9250 true Chr06: 460537-469786 Sorghum bicolor
Sobic.006G002700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 464787-469786 Sorghum bicolor
Sobic.006G002700 5.0kb downstream 5.0kb downstream 9250 true Chr06: 455537-464786 Sorghum bicolor
Sobic.006G002700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 455537-460536 Sorghum bicolor
Sobic.006G002700 10.0kb upstream 10.0kb upstream 14250 true Chr06: 460537-474786 Sorghum bicolor
Sobic.006G002700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 464787-474786 Sorghum bicolor
Sobic.006G002700 10.0kb downstream 10.0kb downstream 14250 true Chr06: 450537-464786 Sorghum bicolor
Sobic.006G002700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 450537-460536 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122005802 5273 Angiosperm View MSA
122180297 5267 Panicoideae View MSA
124576832 5269 Grass View MSA
121275940 5274 Embryophyte View MSA
123314254 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.228     High  
cufflinks 8.481     High Low
cufflinks 15.533     High Low
cufflinks 35.323     High  
cufflinks 30.426     High  
cufflinks 30.849     High  
cufflinks 60.218     High  
cufflinks 33.532     High  
cufflinks 54.21     High  
cufflinks 53.089     High  
cufflinks 89.65     High  
cufflinks 109.899     High High
cufflinks 76.065     High  
cufflinks 100.65     High High
cufflinks 38.716     High  
cufflinks 15.217     High Low
cufflinks 63.868     High  
cufflinks 61.88     High  
cufflinks 17.887     High Low
cufflinks 87.873     High  
cufflinks 22.451     High  
cufflinks 85.68     High  
cufflinks 95.47     High  
cufflinks 95.469     High  
cufflinks 18.029     High Low
cufflinks 8.096     High Low
cufflinks 75.272     High  
cufflinks 5.351       Low
cufflinks 83.77     High  
cufflinks 52.585     High  

0 Strain