Gene : Sobic.001G524900 S. bicolor v3.1.1
Defline:  (1 of 1) K02931 - large subunit ribosomal protein L5 (RP-L5, MRPL5, rplE) Genomic Order:  5521
Name:  ? Sobic.001G524900 Secondary Identifier:  ? PAC:37943844
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G524900 0.5kb upstream 0.5kb upstream 2459 true Chr01: 78924770-78927228 Sorghum bicolor
Sobic.001G524900 0.5kb upstream 0.5kb upstream 500 false Chr01: 78924770-78925269 Sorghum bicolor
Sobic.001G524900 0.5kb downstream 0.5kb downstream 2459 true Chr01: 78925270-78927728 Sorghum bicolor
Sobic.001G524900 0.5kb downstream 0.5kb downstream 500 false Chr01: 78927229-78927728 Sorghum bicolor
Sobic.001G524900 1.0kb upstream 1.0kb upstream 2959 true Chr01: 78924270-78927228 Sorghum bicolor
Sobic.001G524900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 78924270-78925269 Sorghum bicolor
Sobic.001G524900 1.0kb downstream 1.0kb downstream 2959 true Chr01: 78925270-78928228 Sorghum bicolor
Sobic.001G524900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 78927229-78928228 Sorghum bicolor
Sobic.001G524900 2.0kb upstream 2.0kb upstream 3959 true Chr01: 78923270-78927228 Sorghum bicolor
Sobic.001G524900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 78923270-78925269 Sorghum bicolor
Sobic.001G524900 2.0kb downstream 2.0kb downstream 3959 true Chr01: 78925270-78929228 Sorghum bicolor
Sobic.001G524900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 78927229-78929228 Sorghum bicolor
Sobic.001G524900 5.0kb upstream 5.0kb upstream 6959 true Chr01: 78920270-78927228 Sorghum bicolor
Sobic.001G524900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 78920270-78925269 Sorghum bicolor
Sobic.001G524900 5.0kb downstream 5.0kb downstream 6959 true Chr01: 78925270-78932228 Sorghum bicolor
Sobic.001G524900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 78927229-78932228 Sorghum bicolor
Sobic.001G524900 10.0kb upstream 10.0kb upstream 11959 true Chr01: 78915270-78927228 Sorghum bicolor
Sobic.001G524900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 78915270-78925269 Sorghum bicolor
Sobic.001G524900 10.0kb downstream 10.0kb downstream 11959 true Chr01: 78925270-78937228 Sorghum bicolor
Sobic.001G524900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 78927229-78937228 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180743 5267 Panicoideae View MSA
124576773 5269 Grass View MSA
122047733 5273 Angiosperm View MSA
121345632 5274 Embryophyte View MSA
123380248 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.826        
cufflinks 54.482     High High
cufflinks 46.589     High High
cufflinks 17.84     High  
cufflinks 3.758        
cufflinks 17.503     High  
cufflinks 60.84     High High
cufflinks 92.855     High High
cufflinks 3.4        
cufflinks 3.191        
cufflinks 1.091       Low
cufflinks 1.136       Low
cufflinks 2.827        
cufflinks 0.987       Low
cufflinks 9.553        
cufflinks 49.904     High High
cufflinks 56.021     High High
cufflinks 77.425     High High
cufflinks 36.913     High High
cufflinks 17.832     High  
cufflinks 4.063        
cufflinks 1.451       Low
cufflinks 0.987       Low
cufflinks 1.3       Low
cufflinks 13.169     High  
cufflinks 35.668     High High
cufflinks 1.129       Low
cufflinks 2.352        
cufflinks 162.238     High High
cufflinks 8.416        

0 Strain