Gene : Sobic.006G003100 S. bicolor v3.1.1
Defline:  (1 of 3) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  29
Name:  ? Sobic.006G003100 Secondary Identifier:  ? PAC:37945952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G003100 0.5kb upstream 0.5kb upstream 2226 true Chr06: 497517-499742 Sorghum bicolor
Sobic.006G003100 0.5kb upstream 0.5kb upstream 500 false Chr06: 497517-498016 Sorghum bicolor
Sobic.006G003100 0.5kb downstream 0.5kb downstream 2226 true Chr06: 498017-500242 Sorghum bicolor
Sobic.006G003100 0.5kb downstream 0.5kb downstream 500 false Chr06: 499743-500242 Sorghum bicolor
Sobic.006G003100 1.0kb upstream 1.0kb upstream 2726 true Chr06: 497017-499742 Sorghum bicolor
Sobic.006G003100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 497017-498016 Sorghum bicolor
Sobic.006G003100 1.0kb downstream 1.0kb downstream 2726 true Chr06: 498017-500742 Sorghum bicolor
Sobic.006G003100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 499743-500742 Sorghum bicolor
Sobic.006G003100 2.0kb upstream 2.0kb upstream 3726 true Chr06: 496017-499742 Sorghum bicolor
Sobic.006G003100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 496017-498016 Sorghum bicolor
Sobic.006G003100 2.0kb downstream 2.0kb downstream 3726 true Chr06: 498017-501742 Sorghum bicolor
Sobic.006G003100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 499743-501742 Sorghum bicolor
Sobic.006G003100 5.0kb upstream 5.0kb upstream 6726 true Chr06: 493017-499742 Sorghum bicolor
Sobic.006G003100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 493017-498016 Sorghum bicolor
Sobic.006G003100 5.0kb downstream 5.0kb downstream 6726 true Chr06: 498017-504742 Sorghum bicolor
Sobic.006G003100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 499743-504742 Sorghum bicolor
Sobic.006G003100 10.0kb upstream 10.0kb upstream 11726 true Chr06: 488017-499742 Sorghum bicolor
Sobic.006G003100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 488017-498016 Sorghum bicolor
Sobic.006G003100 10.0kb downstream 10.0kb downstream 11726 true Chr06: 498017-509742 Sorghum bicolor
Sobic.006G003100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 499743-509742 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189141 5267 Panicoideae View MSA
124580430 5269 Grass View MSA
122046311 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121346898 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.862        
cufflinks 0.611       Low
cufflinks 0.791       Low
cufflinks 1.481        
cufflinks 5.625        
cufflinks 2.49        
cufflinks 5.964        
cufflinks 0.876       Low
cufflinks 4.263        
cufflinks 3.248        
cufflinks 69.335     High High
cufflinks 48.505     High High
cufflinks 3.818        
cufflinks 97.463     High High
cufflinks 2.702        
cufflinks 0.406       Low
cufflinks 6.079        
cufflinks 5.785        
cufflinks 1.391        
cufflinks 3.506        
cufflinks 4.675        
cufflinks 72.571     High High
cufflinks 58.634     High High
cufflinks 70.938     High High
cufflinks 0.342       Low
cufflinks 0.675       Low
cufflinks 19.829     High  
cufflinks 1.282        
cufflinks 5.32        
cufflinks 4.055        

0 Strain