Gene : Sobic.001G516901 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR34573:SF1 - THIOL-DISULFIDE OXIDOREDUCTASE LTO1 Genomic Order:  5435
Name:  ? Sobic.001G516901 Secondary Identifier:  ? PAC:37942620
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G516901 0.5kb upstream 0.5kb upstream 3345 true Chr01: 78341786-78345130 Sorghum bicolor
Sobic.001G516901 0.5kb upstream 0.5kb upstream 500 false Chr01: 78344631-78345130 Sorghum bicolor
Sobic.001G516901 0.5kb downstream 0.5kb downstream 3345 true Chr01: 78341286-78344630 Sorghum bicolor
Sobic.001G516901 0.5kb downstream 0.5kb downstream 500 false Chr01: 78341286-78341785 Sorghum bicolor
Sobic.001G516901 1.0kb upstream 1.0kb upstream 3845 true Chr01: 78341786-78345630 Sorghum bicolor
Sobic.001G516901 1.0kb upstream 1.0kb upstream 1000 false Chr01: 78344631-78345630 Sorghum bicolor
Sobic.001G516901 1.0kb downstream 1.0kb downstream 3845 true Chr01: 78340786-78344630 Sorghum bicolor
Sobic.001G516901 1.0kb downstream 1.0kb downstream 1000 false Chr01: 78340786-78341785 Sorghum bicolor
Sobic.001G516901 2.0kb upstream 2.0kb upstream 4845 true Chr01: 78341786-78346630 Sorghum bicolor
Sobic.001G516901 2.0kb upstream 2.0kb upstream 2000 false Chr01: 78344631-78346630 Sorghum bicolor
Sobic.001G516901 2.0kb downstream 2.0kb downstream 4845 true Chr01: 78339786-78344630 Sorghum bicolor
Sobic.001G516901 2.0kb downstream 2.0kb downstream 2000 false Chr01: 78339786-78341785 Sorghum bicolor
Sobic.001G516901 5.0kb upstream 5.0kb upstream 7845 true Chr01: 78341786-78349630 Sorghum bicolor
Sobic.001G516901 5.0kb upstream 5.0kb upstream 5000 false Chr01: 78344631-78349630 Sorghum bicolor
Sobic.001G516901 5.0kb downstream 5.0kb downstream 7845 true Chr01: 78336786-78344630 Sorghum bicolor
Sobic.001G516901 5.0kb downstream 5.0kb downstream 5000 false Chr01: 78336786-78341785 Sorghum bicolor
Sobic.001G516901 10.0kb upstream 10.0kb upstream 12845 true Chr01: 78341786-78354630 Sorghum bicolor
Sobic.001G516901 10.0kb upstream 10.0kb upstream 10000 false Chr01: 78344631-78354630 Sorghum bicolor
Sobic.001G516901 10.0kb downstream 10.0kb downstream 12845 true Chr01: 78331786-78344630 Sorghum bicolor
Sobic.001G516901 10.0kb downstream 10.0kb downstream 10000 false Chr01: 78331786-78341785 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178500 5267 Panicoideae View MSA
124579724 5269 Grass View MSA
122046351 5273 Angiosperm View MSA
121343907 5274 Embryophyte View MSA
123424109 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.292        
cufflinks 9.766     High  
cufflinks 10.748     High  
cufflinks 11.197       High
cufflinks 5.109        
cufflinks 11.183       High
cufflinks 13.995     High High
cufflinks 10.632     High  
cufflinks 7.736        
cufflinks 7.969        
cufflinks 4.192        
cufflinks 5.406        
cufflinks 5.641        
cufflinks 4.044       Low
cufflinks 7.462        
cufflinks 7.818        
cufflinks 13.386     High High
cufflinks 14.075     High High
cufflinks 4.59        
cufflinks 13.371     High High
cufflinks 7.755        
cufflinks 4.862        
cufflinks 4.336        
cufflinks 4.387        
cufflinks 10.746     High  
cufflinks 11.22     High High
cufflinks 3.726       Low
cufflinks 2.287       Low
cufflinks 21.576     High High
cufflinks 8.182        

0 Strain