Gene : Sobic.001G514800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23416//PTHR23416:SF63 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  5414
Name:  ? Sobic.001G514800 Secondary Identifier:  ? PAC:37943633
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor CYSTSYN-PWY Sorghum bicolor pathologic  
Sbicolor PWY-6936 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G514800 0.5kb upstream 0.5kb upstream 8990 true Chr01: 78190042-78199031 Sorghum bicolor
Sobic.001G514800 0.5kb upstream 0.5kb upstream 500 false Chr01: 78190042-78190541 Sorghum bicolor
Sobic.001G514800 0.5kb downstream 0.5kb downstream 8990 true Chr01: 78190542-78199531 Sorghum bicolor
Sobic.001G514800 0.5kb downstream 0.5kb downstream 500 false Chr01: 78199032-78199531 Sorghum bicolor
Sobic.001G514800 1.0kb upstream 1.0kb upstream 9490 true Chr01: 78189542-78199031 Sorghum bicolor
Sobic.001G514800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 78189542-78190541 Sorghum bicolor
Sobic.001G514800 1.0kb downstream 1.0kb downstream 9490 true Chr01: 78190542-78200031 Sorghum bicolor
Sobic.001G514800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 78199032-78200031 Sorghum bicolor
Sobic.001G514800 2.0kb upstream 2.0kb upstream 10490 true Chr01: 78188542-78199031 Sorghum bicolor
Sobic.001G514800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 78188542-78190541 Sorghum bicolor
Sobic.001G514800 2.0kb downstream 2.0kb downstream 10490 true Chr01: 78190542-78201031 Sorghum bicolor
Sobic.001G514800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 78199032-78201031 Sorghum bicolor
Sobic.001G514800 5.0kb upstream 5.0kb upstream 13490 true Chr01: 78185542-78199031 Sorghum bicolor
Sobic.001G514800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 78185542-78190541 Sorghum bicolor
Sobic.001G514800 5.0kb downstream 5.0kb downstream 13490 true Chr01: 78190542-78204031 Sorghum bicolor
Sobic.001G514800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 78199032-78204031 Sorghum bicolor
Sobic.001G514800 10.0kb upstream 10.0kb upstream 18490 true Chr01: 78180542-78199031 Sorghum bicolor
Sobic.001G514800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 78180542-78190541 Sorghum bicolor
Sobic.001G514800 10.0kb downstream 10.0kb downstream 18490 true Chr01: 78190542-78209031 Sorghum bicolor
Sobic.001G514800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 78199032-78209031 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180649 5267 Panicoideae View MSA
124589856 5269 Grass View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.114        
cufflinks 58.711     High High
cufflinks 22.38     High High
cufflinks 11.831        
cufflinks 2.984        
cufflinks 16.726     High  
cufflinks 15.738     High  
cufflinks 19.284     High High
cufflinks 7.92        
cufflinks 12.596     High  
cufflinks 2.808       Low
cufflinks 2.048       Low
cufflinks 6.602        
cufflinks 5.287        
cufflinks 8.087        
cufflinks 30.117     High High
cufflinks 14.705     High  
cufflinks 18.055     High  
cufflinks 14.636     High  
cufflinks 12.993     High  
cufflinks 3.168        
cufflinks 2.637       Low
cufflinks 2.876       Low
cufflinks 2.758       Low
cufflinks 40.708     High High
cufflinks 48.184     High High
cufflinks 3.111        
cufflinks 16.586     High  
cufflinks 9.212        
cufflinks 5.255        

0 Strain