Gene : Sobic.001G517500 S. bicolor v3.1.1
Defline:  (1 of 2) K04523 - ubiquilin (UBQLN, DSK2) Genomic Order:  5440
Name:  ? Sobic.001G517500 Secondary Identifier:  ? PAC:37938506
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G517500 0.5kb upstream 0.5kb upstream 5047 true Chr01: 78372681-78377727 Sorghum bicolor
Sobic.001G517500 0.5kb upstream 0.5kb upstream 500 false Chr01: 78372681-78373180 Sorghum bicolor
Sobic.001G517500 0.5kb downstream 0.5kb downstream 5047 true Chr01: 78373181-78378227 Sorghum bicolor
Sobic.001G517500 0.5kb downstream 0.5kb downstream 500 false Chr01: 78377728-78378227 Sorghum bicolor
Sobic.001G517500 1.0kb upstream 1.0kb upstream 5547 true Chr01: 78372181-78377727 Sorghum bicolor
Sobic.001G517500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 78372181-78373180 Sorghum bicolor
Sobic.001G517500 1.0kb downstream 1.0kb downstream 5547 true Chr01: 78373181-78378727 Sorghum bicolor
Sobic.001G517500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 78377728-78378727 Sorghum bicolor
Sobic.001G517500 2.0kb upstream 2.0kb upstream 6547 true Chr01: 78371181-78377727 Sorghum bicolor
Sobic.001G517500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 78371181-78373180 Sorghum bicolor
Sobic.001G517500 2.0kb downstream 2.0kb downstream 6547 true Chr01: 78373181-78379727 Sorghum bicolor
Sobic.001G517500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 78377728-78379727 Sorghum bicolor
Sobic.001G517500 5.0kb upstream 5.0kb upstream 9547 true Chr01: 78368181-78377727 Sorghum bicolor
Sobic.001G517500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 78368181-78373180 Sorghum bicolor
Sobic.001G517500 5.0kb downstream 5.0kb downstream 9547 true Chr01: 78373181-78382727 Sorghum bicolor
Sobic.001G517500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 78377728-78382727 Sorghum bicolor
Sobic.001G517500 10.0kb upstream 10.0kb upstream 14547 true Chr01: 78363181-78377727 Sorghum bicolor
Sobic.001G517500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 78363181-78373180 Sorghum bicolor
Sobic.001G517500 10.0kb downstream 10.0kb downstream 14547 true Chr01: 78373181-78387727 Sorghum bicolor
Sobic.001G517500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 78377728-78387727 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178835 5267 Panicoideae View MSA
124588413 5269 Grass View MSA
122045847 5273 Angiosperm View MSA
121343962 5274 Embryophyte View MSA
123426424 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.145     High  
cufflinks 16.377     High Low
cufflinks 29.854     High  
cufflinks 27.516     High  
cufflinks 27.626     High  
cufflinks 27.487     High  
cufflinks 24.304     High  
cufflinks 17.26     High Low
cufflinks 39.11     High High
cufflinks 38.213     High High
cufflinks 22.262     High  
cufflinks 23.771     High  
cufflinks 39.803     High High
cufflinks 25.624     High  
cufflinks 39.18     High High
cufflinks 23.031     High  
cufflinks 26.289     High  
cufflinks 26.568     High  
cufflinks 19.393     High Low
cufflinks 30.458     High  
cufflinks 27.686     High  
cufflinks 23.549     High  
cufflinks 24.386     High  
cufflinks 23.9     High  
cufflinks 17.642     High Low
cufflinks 13.31     High Low
cufflinks 32.127     High  
cufflinks 29.521     High  
cufflinks 22.446     High  
cufflinks 41.07     High High

0 Strain