Gene : Sobic.001G512400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13018//PTHR13018:SF52 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // SUBFAMILY NOT NAMED Genomic Order:  5387
Name:  ? Sobic.001G512400 Secondary Identifier:  ? PAC:37941912
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G512400 0.5kb upstream 0.5kb upstream 3198 true Chr01: 78011687-78014884 Sorghum bicolor
Sobic.001G512400 0.5kb upstream 0.5kb upstream 500 false Chr01: 78014385-78014884 Sorghum bicolor
Sobic.001G512400 0.5kb downstream 0.5kb downstream 3198 true Chr01: 78011187-78014384 Sorghum bicolor
Sobic.001G512400 0.5kb downstream 0.5kb downstream 500 false Chr01: 78011187-78011686 Sorghum bicolor
Sobic.001G512400 1.0kb upstream 1.0kb upstream 3698 true Chr01: 78011687-78015384 Sorghum bicolor
Sobic.001G512400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 78014385-78015384 Sorghum bicolor
Sobic.001G512400 1.0kb downstream 1.0kb downstream 3698 true Chr01: 78010687-78014384 Sorghum bicolor
Sobic.001G512400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 78010687-78011686 Sorghum bicolor
Sobic.001G512400 2.0kb upstream 2.0kb upstream 4698 true Chr01: 78011687-78016384 Sorghum bicolor
Sobic.001G512400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 78014385-78016384 Sorghum bicolor
Sobic.001G512400 2.0kb downstream 2.0kb downstream 4698 true Chr01: 78009687-78014384 Sorghum bicolor
Sobic.001G512400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 78009687-78011686 Sorghum bicolor
Sobic.001G512400 5.0kb upstream 5.0kb upstream 7698 true Chr01: 78011687-78019384 Sorghum bicolor
Sobic.001G512400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 78014385-78019384 Sorghum bicolor
Sobic.001G512400 5.0kb downstream 5.0kb downstream 7698 true Chr01: 78006687-78014384 Sorghum bicolor
Sobic.001G512400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 78006687-78011686 Sorghum bicolor
Sobic.001G512400 10.0kb upstream 10.0kb upstream 12698 true Chr01: 78011687-78024384 Sorghum bicolor
Sobic.001G512400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 78014385-78024384 Sorghum bicolor
Sobic.001G512400 10.0kb downstream 10.0kb downstream 12698 true Chr01: 78001687-78014384 Sorghum bicolor
Sobic.001G512400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 78001687-78011686 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182549 5267 Panicoideae View MSA
124568387 5269 Grass View MSA
122043002 5273 Angiosperm View MSA
121310062 5274 Embryophyte View MSA
123347658 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.234     High High
cufflinks 13.441     High  
cufflinks 10.235     High  
cufflinks 7.565       Low
cufflinks 12.236        
cufflinks 10.651        
cufflinks 17.301     High High
cufflinks 11.447     High  
cufflinks 12.621     High  
cufflinks 13.273     High  
cufflinks 13.393     High  
cufflinks 13.64     High  
cufflinks 13.201     High  
cufflinks 11.45        
cufflinks 17.113     High High
cufflinks 9.463        
cufflinks 14.39     High  
cufflinks 14.843     High  
cufflinks 10.174        
cufflinks 10.409        
cufflinks 10.406        
cufflinks 10.407        
cufflinks 13.66     High  
cufflinks 12.589     High  
cufflinks 11.315     High  
cufflinks 11.807     High  
cufflinks 18.212     High High
cufflinks 34.91     High High
cufflinks 11.934     High  
cufflinks 14.055     High  

0 Strain