Gene : Sobic.006G008300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12802//PTHR12802:SF39 - SWI/SNF COMPLEX-RELATED // SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  89
Name:  ? Sobic.006G008300 Secondary Identifier:  ? PAC:37947468
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G008300 0.5kb upstream 0.5kb upstream 8699 true Chr06: 1242186-1250884 Sorghum bicolor
Sobic.006G008300 0.5kb upstream 0.5kb upstream 500 false Chr06: 1242186-1242685 Sorghum bicolor
Sobic.006G008300 0.5kb downstream 0.5kb downstream 8699 true Chr06: 1242686-1251384 Sorghum bicolor
Sobic.006G008300 0.5kb downstream 0.5kb downstream 500 false Chr06: 1250885-1251384 Sorghum bicolor
Sobic.006G008300 1.0kb upstream 1.0kb upstream 9199 true Chr06: 1241686-1250884 Sorghum bicolor
Sobic.006G008300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1241686-1242685 Sorghum bicolor
Sobic.006G008300 1.0kb downstream 1.0kb downstream 9199 true Chr06: 1242686-1251884 Sorghum bicolor
Sobic.006G008300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1250885-1251884 Sorghum bicolor
Sobic.006G008300 2.0kb upstream 2.0kb upstream 10199 true Chr06: 1240686-1250884 Sorghum bicolor
Sobic.006G008300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1240686-1242685 Sorghum bicolor
Sobic.006G008300 2.0kb downstream 2.0kb downstream 10199 true Chr06: 1242686-1252884 Sorghum bicolor
Sobic.006G008300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1250885-1252884 Sorghum bicolor
Sobic.006G008300 5.0kb upstream 5.0kb upstream 13199 true Chr06: 1237686-1250884 Sorghum bicolor
Sobic.006G008300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1237686-1242685 Sorghum bicolor
Sobic.006G008300 5.0kb downstream 5.0kb downstream 13199 true Chr06: 1242686-1255884 Sorghum bicolor
Sobic.006G008300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1250885-1255884 Sorghum bicolor
Sobic.006G008300 10.0kb upstream 10.0kb upstream 18199 true Chr06: 1232686-1250884 Sorghum bicolor
Sobic.006G008300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1232686-1242685 Sorghum bicolor
Sobic.006G008300 10.0kb downstream 10.0kb downstream 18199 true Chr06: 1242686-1260884 Sorghum bicolor
Sobic.006G008300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1250885-1260884 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181400 5267 Panicoideae View MSA
124585307 5269 Grass View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.116        
cufflinks 0.086       Low
cufflinks 0.232       Low
cufflinks 0.353        
cufflinks 2.512       High
cufflinks 0.588        
cufflinks 0.917        
cufflinks 0.143       Low
cufflinks 1.279        
cufflinks 1.296        
cufflinks 0.679        
cufflinks 0.772        
cufflinks 0.957        
cufflinks 0.648        
cufflinks 1.144        
cufflinks 0.294        
cufflinks 0.891        
cufflinks 0.933        
cufflinks 0.251        
cufflinks 0.942        
cufflinks 6.443       High
cufflinks 0.58        
cufflinks 0.609        
cufflinks 0.664        
cufflinks 0.038     Low Low
cufflinks 0.052       Low
cufflinks 0.473        
cufflinks 0.881        
cufflinks 0.733        
cufflinks 1.858       High

0 Strain