Gene : Sobic.006G009100 S. bicolor v3.1.1
Defline:  (1 of 6) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  98
Name:  ? Sobic.006G009100 Secondary Identifier:  ? PAC:37945341
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G009100 0.5kb upstream 0.5kb upstream 3272 true Chr06: 1370036-1373307 Sorghum bicolor
Sobic.006G009100 0.5kb upstream 0.5kb upstream 500 false Chr06: 1370036-1370535 Sorghum bicolor
Sobic.006G009100 0.5kb downstream 0.5kb downstream 3272 true Chr06: 1370536-1373807 Sorghum bicolor
Sobic.006G009100 0.5kb downstream 0.5kb downstream 500 false Chr06: 1373308-1373807 Sorghum bicolor
Sobic.006G009100 1.0kb upstream 1.0kb upstream 3772 true Chr06: 1369536-1373307 Sorghum bicolor
Sobic.006G009100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1369536-1370535 Sorghum bicolor
Sobic.006G009100 1.0kb downstream 1.0kb downstream 3772 true Chr06: 1370536-1374307 Sorghum bicolor
Sobic.006G009100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1373308-1374307 Sorghum bicolor
Sobic.006G009100 2.0kb upstream 2.0kb upstream 4772 true Chr06: 1368536-1373307 Sorghum bicolor
Sobic.006G009100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1368536-1370535 Sorghum bicolor
Sobic.006G009100 2.0kb downstream 2.0kb downstream 4772 true Chr06: 1370536-1375307 Sorghum bicolor
Sobic.006G009100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1373308-1375307 Sorghum bicolor
Sobic.006G009100 5.0kb upstream 5.0kb upstream 7772 true Chr06: 1365536-1373307 Sorghum bicolor
Sobic.006G009100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1365536-1370535 Sorghum bicolor
Sobic.006G009100 5.0kb downstream 5.0kb downstream 7772 true Chr06: 1370536-1378307 Sorghum bicolor
Sobic.006G009100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1373308-1378307 Sorghum bicolor
Sobic.006G009100 10.0kb upstream 10.0kb upstream 12772 true Chr06: 1360536-1373307 Sorghum bicolor
Sobic.006G009100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1360536-1370535 Sorghum bicolor
Sobic.006G009100 10.0kb downstream 10.0kb downstream 12772 true Chr06: 1370536-1383307 Sorghum bicolor
Sobic.006G009100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1373308-1383307 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028106 5273 Angiosperm View MSA
122192807 5267 Panicoideae View MSA
124587409 5269 Grass View MSA
121297649 5274 Embryophyte View MSA
123335684 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.327        
cufflinks 0.399        
cufflinks 3.653        
cufflinks 0.46        
cufflinks 0.124       Low
cufflinks 3.114        
cufflinks 2.831        
cufflinks 2.126        
cufflinks 0.197       Low
cufflinks 0.103       Low
cufflinks 51.845     High High
cufflinks 19.833     High High
cufflinks 0.132       Low
cufflinks 39.719     High High
cufflinks 0.494        
cufflinks 3.279        
cufflinks 1.488        
cufflinks 1.982        
cufflinks 1.819        
cufflinks 0.975        
cufflinks 0.026     Low Low
cufflinks 24.325     High High
cufflinks 26.994     High High
cufflinks 24.949     High High
cufflinks 2.861        
cufflinks 0.999        
cufflinks 27.945     High High
cufflinks 0.253       Low
cufflinks 1.341        
cufflinks 3.892        

0 Strain