Gene : Sobic.001G500700 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  5260
Name:  ? Sobic.001G500700 Secondary Identifier:  ? PAC:37938667
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G500700 0.5kb upstream 0.5kb upstream 3584 true Chr01: 76995959-76999542 Sorghum bicolor
Sobic.001G500700 0.5kb upstream 0.5kb upstream 500 false Chr01: 76995959-76996458 Sorghum bicolor
Sobic.001G500700 0.5kb downstream 0.5kb downstream 3584 true Chr01: 76996459-77000042 Sorghum bicolor
Sobic.001G500700 0.5kb downstream 0.5kb downstream 500 false Chr01: 76999543-77000042 Sorghum bicolor
Sobic.001G500700 1.0kb upstream 1.0kb upstream 4084 true Chr01: 76995459-76999542 Sorghum bicolor
Sobic.001G500700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76995459-76996458 Sorghum bicolor
Sobic.001G500700 1.0kb downstream 1.0kb downstream 4084 true Chr01: 76996459-77000542 Sorghum bicolor
Sobic.001G500700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76999543-77000542 Sorghum bicolor
Sobic.001G500700 2.0kb upstream 2.0kb upstream 5084 true Chr01: 76994459-76999542 Sorghum bicolor
Sobic.001G500700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76994459-76996458 Sorghum bicolor
Sobic.001G500700 2.0kb downstream 2.0kb downstream 5084 true Chr01: 76996459-77001542 Sorghum bicolor
Sobic.001G500700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76999543-77001542 Sorghum bicolor
Sobic.001G500700 5.0kb upstream 5.0kb upstream 8084 true Chr01: 76991459-76999542 Sorghum bicolor
Sobic.001G500700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76991459-76996458 Sorghum bicolor
Sobic.001G500700 5.0kb downstream 5.0kb downstream 8084 true Chr01: 76996459-77004542 Sorghum bicolor
Sobic.001G500700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76999543-77004542 Sorghum bicolor
Sobic.001G500700 10.0kb upstream 10.0kb upstream 13084 true Chr01: 76986459-76999542 Sorghum bicolor
Sobic.001G500700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76986459-76996458 Sorghum bicolor
Sobic.001G500700 10.0kb downstream 10.0kb downstream 13084 true Chr01: 76996459-77009542 Sorghum bicolor
Sobic.001G500700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76999543-77009542 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180657 5267 Panicoideae View MSA
124573832 5269 Grass View MSA
122047185 5273 Angiosperm View MSA
121347839 5274 Embryophyte View MSA
123423892 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.695        
cufflinks 17.633     High High
cufflinks 4.77        
cufflinks 2.725        
cufflinks 0.566        
cufflinks 3.121        
cufflinks 5.387        
cufflinks 11.135     High High
cufflinks 1.732        
cufflinks 1.702        
cufflinks 0.57        
cufflinks 0.922        
cufflinks 1.29        
cufflinks 0.575        
cufflinks 2.602        
cufflinks 12.558     High High
cufflinks 5.22        
cufflinks 6.98       High
cufflinks 4.545        
cufflinks 5.051        
cufflinks 0.716        
cufflinks 0.63        
cufflinks 0.603        
cufflinks 0.461       Low
cufflinks 11.091     High High
cufflinks 22.5     High High
cufflinks 0.528        
cufflinks 2.173        
cufflinks 3.203        
cufflinks 1.658        

0 Strain