Gene : Sobic.001G501400 S. bicolor v3.1.1
Defline:  (1 of 1) K14556 - U3 small nucleolar RNA-associated protein 12 (DIP2, UTP12, WDR3) Genomic Order:  5267
Name:  ? Sobic.001G501400 Secondary Identifier:  ? PAC:37941922
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G501400 0.5kb upstream 0.5kb upstream 6284 true Chr01: 77049705-77055988 Sorghum bicolor
Sobic.001G501400 0.5kb upstream 0.5kb upstream 500 false Chr01: 77055489-77055988 Sorghum bicolor
Sobic.001G501400 0.5kb downstream 0.5kb downstream 6284 true Chr01: 77049205-77055488 Sorghum bicolor
Sobic.001G501400 0.5kb downstream 0.5kb downstream 500 false Chr01: 77049205-77049704 Sorghum bicolor
Sobic.001G501400 1.0kb upstream 1.0kb upstream 6784 true Chr01: 77049705-77056488 Sorghum bicolor
Sobic.001G501400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 77055489-77056488 Sorghum bicolor
Sobic.001G501400 1.0kb downstream 1.0kb downstream 6784 true Chr01: 77048705-77055488 Sorghum bicolor
Sobic.001G501400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 77048705-77049704 Sorghum bicolor
Sobic.001G501400 2.0kb upstream 2.0kb upstream 7784 true Chr01: 77049705-77057488 Sorghum bicolor
Sobic.001G501400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 77055489-77057488 Sorghum bicolor
Sobic.001G501400 2.0kb downstream 2.0kb downstream 7784 true Chr01: 77047705-77055488 Sorghum bicolor
Sobic.001G501400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 77047705-77049704 Sorghum bicolor
Sobic.001G501400 5.0kb upstream 5.0kb upstream 10784 true Chr01: 77049705-77060488 Sorghum bicolor
Sobic.001G501400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 77055489-77060488 Sorghum bicolor
Sobic.001G501400 5.0kb downstream 5.0kb downstream 10784 true Chr01: 77044705-77055488 Sorghum bicolor
Sobic.001G501400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 77044705-77049704 Sorghum bicolor
Sobic.001G501400 10.0kb upstream 10.0kb upstream 15784 true Chr01: 77049705-77065488 Sorghum bicolor
Sobic.001G501400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 77055489-77065488 Sorghum bicolor
Sobic.001G501400 10.0kb downstream 10.0kb downstream 15784 true Chr01: 77039705-77055488 Sorghum bicolor
Sobic.001G501400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 77039705-77049704 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186500 5267 Panicoideae View MSA
124568699 5269 Grass View MSA
122046155 5273 Angiosperm View MSA
121346306 5274 Embryophyte View MSA
123424601 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.836     High High
cufflinks 1.464       Low
cufflinks 1.939       Low
cufflinks 5.647        
cufflinks 13.435     High  
cufflinks 3.437        
cufflinks 4.904        
cufflinks 1.336       Low
cufflinks 10.297        
cufflinks 10.675        
cufflinks 12.282     High  
cufflinks 10.725        
cufflinks 5.399        
cufflinks 10.433        
cufflinks 5.505        
cufflinks 1.809       Low
cufflinks 4.704        
cufflinks 4.972        
cufflinks 2.227       Low
cufflinks 4.315        
cufflinks 18.087     High High
cufflinks 13.965     High  
cufflinks 12.993     High  
cufflinks 13.798     High  
cufflinks 2.244       Low
cufflinks 0.996       Low
cufflinks 8.254        
cufflinks 9.237        
cufflinks 3.723        
cufflinks 10.537        

0 Strain