Gene : Sobic.001G497900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF11 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Genomic Order:  5229
Name:  ? Sobic.001G497900 Secondary Identifier:  ? PAC:37937755
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G497900 0.5kb upstream 0.5kb upstream 7855 true Chr01: 76769769-76777623 Sorghum bicolor
Sobic.001G497900 0.5kb upstream 0.5kb upstream 500 false Chr01: 76777124-76777623 Sorghum bicolor
Sobic.001G497900 0.5kb downstream 0.5kb downstream 7855 true Chr01: 76769269-76777123 Sorghum bicolor
Sobic.001G497900 0.5kb downstream 0.5kb downstream 500 false Chr01: 76769269-76769768 Sorghum bicolor
Sobic.001G497900 1.0kb upstream 1.0kb upstream 8355 true Chr01: 76769769-76778123 Sorghum bicolor
Sobic.001G497900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76777124-76778123 Sorghum bicolor
Sobic.001G497900 1.0kb downstream 1.0kb downstream 8355 true Chr01: 76768769-76777123 Sorghum bicolor
Sobic.001G497900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76768769-76769768 Sorghum bicolor
Sobic.001G497900 2.0kb upstream 2.0kb upstream 9355 true Chr01: 76769769-76779123 Sorghum bicolor
Sobic.001G497900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76777124-76779123 Sorghum bicolor
Sobic.001G497900 2.0kb downstream 2.0kb downstream 9355 true Chr01: 76767769-76777123 Sorghum bicolor
Sobic.001G497900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76767769-76769768 Sorghum bicolor
Sobic.001G497900 5.0kb upstream 5.0kb upstream 12355 true Chr01: 76769769-76782123 Sorghum bicolor
Sobic.001G497900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76777124-76782123 Sorghum bicolor
Sobic.001G497900 5.0kb downstream 5.0kb downstream 12355 true Chr01: 76764769-76777123 Sorghum bicolor
Sobic.001G497900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76764769-76769768 Sorghum bicolor
Sobic.001G497900 10.0kb upstream 10.0kb upstream 17355 true Chr01: 76769769-76787123 Sorghum bicolor
Sobic.001G497900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76777124-76787123 Sorghum bicolor
Sobic.001G497900 10.0kb downstream 10.0kb downstream 17355 true Chr01: 76759769-76777123 Sorghum bicolor
Sobic.001G497900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76759769-76769768 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180314 5267 Panicoideae View MSA
124576905 5269 Grass View MSA
122042202 5273 Angiosperm View MSA
121309933 5274 Embryophyte View MSA
123347562 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.897       High
cufflinks 1.274       Low
cufflinks 1.446        
cufflinks 2.041        
cufflinks 2.608        
cufflinks 5.295       High
cufflinks 1.651        
cufflinks 1.196       Low
cufflinks 3.103       High
cufflinks 3.573       High
cufflinks 1.378       Low
cufflinks 2.116        
cufflinks 3.02        
cufflinks 1.465        
cufflinks 2.132        
cufflinks 1.832        
cufflinks 1.707        
cufflinks 1.734        
cufflinks 2.314        
cufflinks 1.887        
cufflinks 4.507       High
cufflinks 1.635        
cufflinks 1.578        
cufflinks 1.514        
cufflinks 1.637        
cufflinks 1.18       Low
cufflinks 1.658        
cufflinks 3.558       High
cufflinks 1.768        
cufflinks 2.082        

0 Strain