Gene : Sobic.001G500000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13789//PTHR13789:SF247 - MONOOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  5253
Name:  ? Sobic.001G500000 Secondary Identifier:  ? PAC:37944504
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G500000 0.5kb upstream 0.5kb upstream 3742 true Chr01: 76934058-76937799 Sorghum bicolor
Sobic.001G500000 0.5kb upstream 0.5kb upstream 500 false Chr01: 76937300-76937799 Sorghum bicolor
Sobic.001G500000 0.5kb downstream 0.5kb downstream 3742 true Chr01: 76933558-76937299 Sorghum bicolor
Sobic.001G500000 0.5kb downstream 0.5kb downstream 500 false Chr01: 76933558-76934057 Sorghum bicolor
Sobic.001G500000 1.0kb upstream 1.0kb upstream 4242 true Chr01: 76934058-76938299 Sorghum bicolor
Sobic.001G500000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76937300-76938299 Sorghum bicolor
Sobic.001G500000 1.0kb downstream 1.0kb downstream 4242 true Chr01: 76933058-76937299 Sorghum bicolor
Sobic.001G500000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76933058-76934057 Sorghum bicolor
Sobic.001G500000 2.0kb upstream 2.0kb upstream 5242 true Chr01: 76934058-76939299 Sorghum bicolor
Sobic.001G500000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76937300-76939299 Sorghum bicolor
Sobic.001G500000 2.0kb downstream 2.0kb downstream 5242 true Chr01: 76932058-76937299 Sorghum bicolor
Sobic.001G500000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76932058-76934057 Sorghum bicolor
Sobic.001G500000 5.0kb upstream 5.0kb upstream 8242 true Chr01: 76934058-76942299 Sorghum bicolor
Sobic.001G500000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76937300-76942299 Sorghum bicolor
Sobic.001G500000 5.0kb downstream 5.0kb downstream 8242 true Chr01: 76929058-76937299 Sorghum bicolor
Sobic.001G500000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76929058-76934057 Sorghum bicolor
Sobic.001G500000 10.0kb upstream 10.0kb upstream 13242 true Chr01: 76934058-76947299 Sorghum bicolor
Sobic.001G500000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76937300-76947299 Sorghum bicolor
Sobic.001G500000 10.0kb downstream 10.0kb downstream 13242 true Chr01: 76924058-76937299 Sorghum bicolor
Sobic.001G500000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76924058-76934057 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186027 5267 Panicoideae View MSA
124576354 5269 Grass View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.773     High High
cufflinks 0.055       Low
cufflinks 0.223        
cufflinks 0.119        
cufflinks 1.688        
cufflinks 0.166        
cufflinks 0.147        
cufflinks 0.067       Low
cufflinks 0.353        
cufflinks 0.391        
cufflinks 11.564       High
cufflinks 1.745        
cufflinks 0.4        
cufflinks 4.977       High
cufflinks 0.152        
cufflinks 0.35        
cufflinks 0.086     Low  
cufflinks 0.103        
cufflinks 0.115        
cufflinks 0.089     Low  
cufflinks 0.06     Low Low
cufflinks 3.986       High
cufflinks 2.317        
cufflinks 2.223        
cufflinks 0.01     Low Low
cufflinks 0.008     Low Low
cufflinks 3.275        
cufflinks 20.413     High High
cufflinks 0.261        
cufflinks 0.065     Low Low

0 Strain