Gene : Sobic.001G494300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11390//PTHR11390:SF21 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE 3-ALPHA Genomic Order:  5184
Name:  ? Sobic.001G494300 Secondary Identifier:  ? PAC:37940873
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G494300 0.5kb upstream 0.5kb upstream 11183 true Chr01: 76333594-76344776 Sorghum bicolor
Sobic.001G494300 0.5kb upstream 0.5kb upstream 500 false Chr01: 76333594-76334093 Sorghum bicolor
Sobic.001G494300 0.5kb downstream 0.5kb downstream 11183 true Chr01: 76334094-76345276 Sorghum bicolor
Sobic.001G494300 0.5kb downstream 0.5kb downstream 500 false Chr01: 76344777-76345276 Sorghum bicolor
Sobic.001G494300 1.0kb upstream 1.0kb upstream 11683 true Chr01: 76333094-76344776 Sorghum bicolor
Sobic.001G494300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76333094-76334093 Sorghum bicolor
Sobic.001G494300 1.0kb downstream 1.0kb downstream 11683 true Chr01: 76334094-76345776 Sorghum bicolor
Sobic.001G494300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76344777-76345776 Sorghum bicolor
Sobic.001G494300 2.0kb upstream 2.0kb upstream 12683 true Chr01: 76332094-76344776 Sorghum bicolor
Sobic.001G494300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76332094-76334093 Sorghum bicolor
Sobic.001G494300 2.0kb downstream 2.0kb downstream 12683 true Chr01: 76334094-76346776 Sorghum bicolor
Sobic.001G494300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76344777-76346776 Sorghum bicolor
Sobic.001G494300 5.0kb upstream 5.0kb upstream 15683 true Chr01: 76329094-76344776 Sorghum bicolor
Sobic.001G494300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76329094-76334093 Sorghum bicolor
Sobic.001G494300 5.0kb downstream 5.0kb downstream 15683 true Chr01: 76334094-76349776 Sorghum bicolor
Sobic.001G494300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76344777-76349776 Sorghum bicolor
Sobic.001G494300 10.0kb upstream 10.0kb upstream 20683 true Chr01: 76324094-76344776 Sorghum bicolor
Sobic.001G494300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76324094-76334093 Sorghum bicolor
Sobic.001G494300 10.0kb downstream 10.0kb downstream 20683 true Chr01: 76334094-76354776 Sorghum bicolor
Sobic.001G494300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76344777-76354776 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041072 5273 Angiosperm View MSA
122187977 5267 Panicoideae View MSA
124571003 5269 Grass View MSA
121346575 5274 Embryophyte View MSA
123425013 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.115        
cufflinks 0.022     Low Low
cufflinks 0.063       Low
cufflinks 0.061     Low Low
cufflinks 1.018       High
cufflinks 0.158        
cufflinks 0.594        
cufflinks 0.04     Low Low
cufflinks 0.227        
cufflinks 0.256        
cufflinks 0.399        
cufflinks 0.258        
cufflinks 0.19        
cufflinks 0.32        
cufflinks 0.395        
cufflinks 0.027     Low Low
cufflinks 0.491        
cufflinks 0.548        
cufflinks 0.042     Low Low
cufflinks 0.318        
cufflinks 2.113       High
cufflinks 0.47        
cufflinks 0.365        
cufflinks 0.417        
cufflinks 0.032     Low Low
cufflinks 0.015     Low Low
cufflinks 0.217        
cufflinks 0.123        
cufflinks 0.084        
cufflinks 0.574        

0 Strain