Gene : Sobic.001G493800 S. bicolor v3.1.1
Defline:  (1 of 3) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  5178
Name:  ? Sobic.001G493800 Secondary Identifier:  ? PAC:37942371
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G493800 0.5kb upstream 0.5kb upstream 2121 true Chr01: 76283624-76285744 Sorghum bicolor
Sobic.001G493800 0.5kb upstream 0.5kb upstream 500 false Chr01: 76283624-76284123 Sorghum bicolor
Sobic.001G493800 0.5kb downstream 0.5kb downstream 2121 true Chr01: 76284124-76286244 Sorghum bicolor
Sobic.001G493800 0.5kb downstream 0.5kb downstream 500 false Chr01: 76285745-76286244 Sorghum bicolor
Sobic.001G493800 1.0kb upstream 1.0kb upstream 2621 true Chr01: 76283124-76285744 Sorghum bicolor
Sobic.001G493800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76283124-76284123 Sorghum bicolor
Sobic.001G493800 1.0kb downstream 1.0kb downstream 2621 true Chr01: 76284124-76286744 Sorghum bicolor
Sobic.001G493800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76285745-76286744 Sorghum bicolor
Sobic.001G493800 2.0kb upstream 2.0kb upstream 3621 true Chr01: 76282124-76285744 Sorghum bicolor
Sobic.001G493800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76282124-76284123 Sorghum bicolor
Sobic.001G493800 2.0kb downstream 2.0kb downstream 3621 true Chr01: 76284124-76287744 Sorghum bicolor
Sobic.001G493800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76285745-76287744 Sorghum bicolor
Sobic.001G493800 5.0kb upstream 5.0kb upstream 6621 true Chr01: 76279124-76285744 Sorghum bicolor
Sobic.001G493800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76279124-76284123 Sorghum bicolor
Sobic.001G493800 5.0kb downstream 5.0kb downstream 6621 true Chr01: 76284124-76290744 Sorghum bicolor
Sobic.001G493800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76285745-76290744 Sorghum bicolor
Sobic.001G493800 10.0kb upstream 10.0kb upstream 11621 true Chr01: 76274124-76285744 Sorghum bicolor
Sobic.001G493800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76274124-76284123 Sorghum bicolor
Sobic.001G493800 10.0kb downstream 10.0kb downstream 11621 true Chr01: 76284124-76295744 Sorghum bicolor
Sobic.001G493800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76285745-76295744 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185309 5267 Panicoideae View MSA
124572980 5269 Grass View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.446        
cufflinks 1.45       High
cufflinks 0.434        
cufflinks 0.661        
cufflinks 0.318        
cufflinks 1.063        
cufflinks 1.348        
cufflinks 4.894       High
cufflinks 0.172        
cufflinks 0.083        
cufflinks 0.053     Low Low
cufflinks 0.062     Low Low
cufflinks 0.088        
cufflinks 0.033     Low Low
cufflinks 0.134        
cufflinks 1.948       High
cufflinks 1.266        
cufflinks 1.425       High
cufflinks 0.769        
cufflinks 0.963        
cufflinks 0.063     Low Low
cufflinks 0.229        
cufflinks 0.064     Low Low
cufflinks 0.018     Low Low
cufflinks 1.597       High
cufflinks 1.408       High
cufflinks 0.01     Low Low
cufflinks 0.825        
cufflinks 4.203       High
cufflinks 0.476        

0 Strain