Gene : Sobic.006G017000 S. bicolor v3.1.1
Defline:  (1 of 1) K12862 - pleiotropic regulator 1 (PLRG1, PRL1, PRP46) Genomic Order:  179
Name:  ? Sobic.006G017000 Secondary Identifier:  ? PAC:37945443
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G017000 0.5kb upstream 0.5kb upstream 8110 true Chr06: 2673410-2681519 Sorghum bicolor
Sobic.006G017000 0.5kb upstream 0.5kb upstream 500 false Chr06: 2681020-2681519 Sorghum bicolor
Sobic.006G017000 0.5kb downstream 0.5kb downstream 8110 true Chr06: 2672910-2681019 Sorghum bicolor
Sobic.006G017000 0.5kb downstream 0.5kb downstream 500 false Chr06: 2672910-2673409 Sorghum bicolor
Sobic.006G017000 1.0kb upstream 1.0kb upstream 8610 true Chr06: 2673410-2682019 Sorghum bicolor
Sobic.006G017000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2681020-2682019 Sorghum bicolor
Sobic.006G017000 1.0kb downstream 1.0kb downstream 8610 true Chr06: 2672410-2681019 Sorghum bicolor
Sobic.006G017000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2672410-2673409 Sorghum bicolor
Sobic.006G017000 2.0kb upstream 2.0kb upstream 9610 true Chr06: 2673410-2683019 Sorghum bicolor
Sobic.006G017000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2681020-2683019 Sorghum bicolor
Sobic.006G017000 2.0kb downstream 2.0kb downstream 9610 true Chr06: 2671410-2681019 Sorghum bicolor
Sobic.006G017000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2671410-2673409 Sorghum bicolor
Sobic.006G017000 5.0kb upstream 5.0kb upstream 12610 true Chr06: 2673410-2686019 Sorghum bicolor
Sobic.006G017000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2681020-2686019 Sorghum bicolor
Sobic.006G017000 5.0kb downstream 5.0kb downstream 12610 true Chr06: 2668410-2681019 Sorghum bicolor
Sobic.006G017000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2668410-2673409 Sorghum bicolor
Sobic.006G017000 10.0kb upstream 10.0kb upstream 17610 true Chr06: 2673410-2691019 Sorghum bicolor
Sobic.006G017000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2681020-2691019 Sorghum bicolor
Sobic.006G017000 10.0kb downstream 10.0kb downstream 17610 true Chr06: 2663410-2681019 Sorghum bicolor
Sobic.006G017000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2663410-2673409 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178181 5267 Panicoideae View MSA
124573472 5269 Grass View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.167     High High
cufflinks 2.527       Low
cufflinks 4.028        
cufflinks 5.298        
cufflinks 4.141        
cufflinks 5.984        
cufflinks 4.074        
cufflinks 2.323       Low
cufflinks 5.488        
cufflinks 5.88        
cufflinks 4.596        
cufflinks 4.711        
cufflinks 4.715        
cufflinks 4.857        
cufflinks 4.184        
cufflinks 4.564        
cufflinks 4.465        
cufflinks 4.792        
cufflinks 4.66        
cufflinks 5.146        
cufflinks 6.376        
cufflinks 5.543        
cufflinks 5.512        
cufflinks 4.977        
cufflinks 3.309        
cufflinks 2.281       Low
cufflinks 5.014        
cufflinks 9.92     High High
cufflinks 2.723       Low
cufflinks 4.766        

0 Strain