Gene : Sobic.006G017100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12899//PTHR12899:SF10 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  180
Name:  ? Sobic.006G017100 Secondary Identifier:  ? PAC:37947841
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G017100 0.5kb upstream 0.5kb upstream 3617 true Chr06: 2680649-2684265 Sorghum bicolor
Sobic.006G017100 0.5kb upstream 0.5kb upstream 500 false Chr06: 2680649-2681148 Sorghum bicolor
Sobic.006G017100 0.5kb downstream 0.5kb downstream 3617 true Chr06: 2681149-2684765 Sorghum bicolor
Sobic.006G017100 0.5kb downstream 0.5kb downstream 500 false Chr06: 2684266-2684765 Sorghum bicolor
Sobic.006G017100 1.0kb upstream 1.0kb upstream 4117 true Chr06: 2680149-2684265 Sorghum bicolor
Sobic.006G017100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2680149-2681148 Sorghum bicolor
Sobic.006G017100 1.0kb downstream 1.0kb downstream 4117 true Chr06: 2681149-2685265 Sorghum bicolor
Sobic.006G017100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2684266-2685265 Sorghum bicolor
Sobic.006G017100 2.0kb upstream 2.0kb upstream 5117 true Chr06: 2679149-2684265 Sorghum bicolor
Sobic.006G017100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2679149-2681148 Sorghum bicolor
Sobic.006G017100 2.0kb downstream 2.0kb downstream 5117 true Chr06: 2681149-2686265 Sorghum bicolor
Sobic.006G017100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2684266-2686265 Sorghum bicolor
Sobic.006G017100 5.0kb upstream 5.0kb upstream 8117 true Chr06: 2676149-2684265 Sorghum bicolor
Sobic.006G017100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2676149-2681148 Sorghum bicolor
Sobic.006G017100 5.0kb downstream 5.0kb downstream 8117 true Chr06: 2681149-2689265 Sorghum bicolor
Sobic.006G017100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2684266-2689265 Sorghum bicolor
Sobic.006G017100 10.0kb upstream 10.0kb upstream 13117 true Chr06: 2671149-2684265 Sorghum bicolor
Sobic.006G017100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2671149-2681148 Sorghum bicolor
Sobic.006G017100 10.0kb downstream 10.0kb downstream 13117 true Chr06: 2681149-2694265 Sorghum bicolor
Sobic.006G017100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2684266-2694265 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183150 5267 Panicoideae View MSA
124589733 5269 Grass View MSA
122042304 5273 Angiosperm View MSA
121349971 5274 Embryophyte View MSA
123428536 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.328       High
cufflinks 0.122       Low
cufflinks 0.412        
cufflinks 1.02        
cufflinks 0.888        
cufflinks 0.793        
cufflinks 0.628        
cufflinks 0.144       Low
cufflinks 0.859        
cufflinks 1.021        
cufflinks 1.368        
cufflinks 0.874        
cufflinks 0.411        
cufflinks 1.363        
cufflinks 0.785        
cufflinks 0.32       Low
cufflinks 0.699        
cufflinks 0.671        
cufflinks 0.276       Low
cufflinks 0.77        
cufflinks 0.964        
cufflinks 2.536       High
cufflinks 1.669        
cufflinks 1.784        
cufflinks 0.145       Low
cufflinks 0.105       Low
cufflinks 0.823        
cufflinks 1.129        
cufflinks 0.614        
cufflinks 1.215        

0 Strain