Gene : Sobic.006G016900 S. bicolor v3.1.1
Defline:  (1 of 1) 2.5.1.47//4.4.1.9 - Cysteine synthase / OAS sulfhydrylase // L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  177
Name:  ? Sobic.006G016900 Secondary Identifier:  ? PAC:37948453
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor ASPSYNII-PWY Sorghum bicolor pathologic  
Sbicolor CYSTSYN-PWY Sorghum bicolor pathologic  
Sbicolor P401-PWY Sorghum bicolor pathologic  
Sbicolor PWY-6936 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G016900 0.5kb upstream 0.5kb upstream 5082 true Chr06: 2661605-2666686 Sorghum bicolor
Sobic.006G016900 0.5kb upstream 0.5kb upstream 500 false Chr06: 2666187-2666686 Sorghum bicolor
Sobic.006G016900 0.5kb downstream 0.5kb downstream 5082 true Chr06: 2661105-2666186 Sorghum bicolor
Sobic.006G016900 0.5kb downstream 0.5kb downstream 500 false Chr06: 2661105-2661604 Sorghum bicolor
Sobic.006G016900 1.0kb upstream 1.0kb upstream 5582 true Chr06: 2661605-2667186 Sorghum bicolor
Sobic.006G016900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2666187-2667186 Sorghum bicolor
Sobic.006G016900 1.0kb downstream 1.0kb downstream 5582 true Chr06: 2660605-2666186 Sorghum bicolor
Sobic.006G016900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2660605-2661604 Sorghum bicolor
Sobic.006G016900 2.0kb upstream 2.0kb upstream 6582 true Chr06: 2661605-2668186 Sorghum bicolor
Sobic.006G016900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2666187-2668186 Sorghum bicolor
Sobic.006G016900 2.0kb downstream 2.0kb downstream 6582 true Chr06: 2659605-2666186 Sorghum bicolor
Sobic.006G016900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2659605-2661604 Sorghum bicolor
Sobic.006G016900 5.0kb upstream 5.0kb upstream 9582 true Chr06: 2661605-2671186 Sorghum bicolor
Sobic.006G016900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2666187-2671186 Sorghum bicolor
Sobic.006G016900 5.0kb downstream 5.0kb downstream 9582 true Chr06: 2656605-2666186 Sorghum bicolor
Sobic.006G016900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2656605-2661604 Sorghum bicolor
Sobic.006G016900 10.0kb upstream 10.0kb upstream 14582 true Chr06: 2661605-2676186 Sorghum bicolor
Sobic.006G016900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2666187-2676186 Sorghum bicolor
Sobic.006G016900 10.0kb downstream 10.0kb downstream 14582 true Chr06: 2651605-2666186 Sorghum bicolor
Sobic.006G016900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2651605-2661604 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040912 5273 Angiosperm View MSA
122179784 5267 Panicoideae View MSA
124580174 5269 Grass View MSA
121309765 5274 Embryophyte View MSA
123347430 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.241     High  
cufflinks 47.178     High  
cufflinks 72.98     High  
cufflinks 33.012     High  
cufflinks 85.998     High  
cufflinks 45.317     High  
cufflinks 61.174     High  
cufflinks 58.773     High  
cufflinks 29.433     High Low
cufflinks 42.084     High  
cufflinks 32.699     High  
cufflinks 42.045     High  
cufflinks 29.024     High Low
cufflinks 46.196     High  
cufflinks 37.602     High  
cufflinks 87.589     High  
cufflinks 61.369     High  
cufflinks 71.192     High  
cufflinks 75.545     High  
cufflinks 43.624     High  
cufflinks 37.4     High  
cufflinks 72.763     High  
cufflinks 65.44     High  
cufflinks 63.281     High  
cufflinks 124.465     High High
cufflinks 63.512     High  
cufflinks 90.542     High  
cufflinks 4.535       Low
cufflinks 86.655     High  
cufflinks 39.618     High  

0 Strain