Gene : Sobic.001G490600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12899//PTHR12899:SF8 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  5146
Name:  ? Sobic.001G490600 Secondary Identifier:  ? PAC:37943985
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G490600 0.5kb upstream 0.5kb upstream 2992 true Chr01: 76053930-76056921 Sorghum bicolor
Sobic.001G490600 0.5kb upstream 0.5kb upstream 500 false Chr01: 76053930-76054429 Sorghum bicolor
Sobic.001G490600 0.5kb downstream 0.5kb downstream 2992 true Chr01: 76054430-76057421 Sorghum bicolor
Sobic.001G490600 0.5kb downstream 0.5kb downstream 500 false Chr01: 76056922-76057421 Sorghum bicolor
Sobic.001G490600 1.0kb upstream 1.0kb upstream 3492 true Chr01: 76053430-76056921 Sorghum bicolor
Sobic.001G490600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76053430-76054429 Sorghum bicolor
Sobic.001G490600 1.0kb downstream 1.0kb downstream 3492 true Chr01: 76054430-76057921 Sorghum bicolor
Sobic.001G490600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76056922-76057921 Sorghum bicolor
Sobic.001G490600 2.0kb upstream 2.0kb upstream 4492 true Chr01: 76052430-76056921 Sorghum bicolor
Sobic.001G490600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76052430-76054429 Sorghum bicolor
Sobic.001G490600 2.0kb downstream 2.0kb downstream 4492 true Chr01: 76054430-76058921 Sorghum bicolor
Sobic.001G490600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76056922-76058921 Sorghum bicolor
Sobic.001G490600 5.0kb upstream 5.0kb upstream 7492 true Chr01: 76049430-76056921 Sorghum bicolor
Sobic.001G490600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76049430-76054429 Sorghum bicolor
Sobic.001G490600 5.0kb downstream 5.0kb downstream 7492 true Chr01: 76054430-76061921 Sorghum bicolor
Sobic.001G490600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76056922-76061921 Sorghum bicolor
Sobic.001G490600 10.0kb upstream 10.0kb upstream 12492 true Chr01: 76044430-76056921 Sorghum bicolor
Sobic.001G490600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76044430-76054429 Sorghum bicolor
Sobic.001G490600 10.0kb downstream 10.0kb downstream 12492 true Chr01: 76054430-76066921 Sorghum bicolor
Sobic.001G490600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76056922-76066921 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180315 5267 Panicoideae View MSA
124589119 5269 Grass View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.496       High
cufflinks 0.241        
cufflinks 0.274        
cufflinks 0.463       High
cufflinks 0.164        
cufflinks 0.652       High
cufflinks 0.53       High
cufflinks 0.329        
cufflinks 0.377        
cufflinks 0.318        
cufflinks 0.09       Low
cufflinks 0.166        
cufflinks 0.251        
cufflinks 0.143        
cufflinks 0.269        
cufflinks 0.201        
cufflinks 0.399        
cufflinks 0.463       High
cufflinks 0.085     Low Low
cufflinks 0.386        
cufflinks 0.168        
cufflinks 0.214        
cufflinks 0.116       Low
cufflinks 0.158        
cufflinks 0.258        
cufflinks 0.22        
cufflinks 0.249        
cufflinks 0.276        
cufflinks 0.743       High
cufflinks 0.366        

0 Strain