Gene : Sobic.001G490500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24016:SF0 - CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 Genomic Order:  5145
Name:  ? Sobic.001G490500 Secondary Identifier:  ? PAC:37943689
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G490500 0.5kb upstream 0.5kb upstream 5127 true Chr01: 76050892-76056018 Sorghum bicolor
Sobic.001G490500 0.5kb upstream 0.5kb upstream 500 false Chr01: 76055519-76056018 Sorghum bicolor
Sobic.001G490500 0.5kb downstream 0.5kb downstream 5127 true Chr01: 76050392-76055518 Sorghum bicolor
Sobic.001G490500 0.5kb downstream 0.5kb downstream 500 false Chr01: 76050392-76050891 Sorghum bicolor
Sobic.001G490500 1.0kb upstream 1.0kb upstream 5627 true Chr01: 76050892-76056518 Sorghum bicolor
Sobic.001G490500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 76055519-76056518 Sorghum bicolor
Sobic.001G490500 1.0kb downstream 1.0kb downstream 5627 true Chr01: 76049892-76055518 Sorghum bicolor
Sobic.001G490500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 76049892-76050891 Sorghum bicolor
Sobic.001G490500 2.0kb upstream 2.0kb upstream 6627 true Chr01: 76050892-76057518 Sorghum bicolor
Sobic.001G490500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 76055519-76057518 Sorghum bicolor
Sobic.001G490500 2.0kb downstream 2.0kb downstream 6627 true Chr01: 76048892-76055518 Sorghum bicolor
Sobic.001G490500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 76048892-76050891 Sorghum bicolor
Sobic.001G490500 5.0kb upstream 5.0kb upstream 9627 true Chr01: 76050892-76060518 Sorghum bicolor
Sobic.001G490500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 76055519-76060518 Sorghum bicolor
Sobic.001G490500 5.0kb downstream 5.0kb downstream 9627 true Chr01: 76045892-76055518 Sorghum bicolor
Sobic.001G490500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 76045892-76050891 Sorghum bicolor
Sobic.001G490500 10.0kb upstream 10.0kb upstream 14627 true Chr01: 76050892-76065518 Sorghum bicolor
Sobic.001G490500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 76055519-76065518 Sorghum bicolor
Sobic.001G490500 10.0kb downstream 10.0kb downstream 14627 true Chr01: 76040892-76055518 Sorghum bicolor
Sobic.001G490500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 76040892-76050891 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191149 5267 Panicoideae View MSA
124579609 5269 Grass View MSA
122048460 5273 Angiosperm View MSA
121348194 5274 Embryophyte View MSA
123425535 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.646     High High
cufflinks 1.528       Low
cufflinks 2.463       Low
cufflinks 3.474       Low
cufflinks 11.156        
cufflinks 5.322        
cufflinks 8.473        
cufflinks 3.268       Low
cufflinks 8.672        
cufflinks 7.916        
cufflinks 9.799        
cufflinks 12.885     High  
cufflinks 11.028        
cufflinks 15.125     High  
cufflinks 10.084        
cufflinks 3.508       Low
cufflinks 9.816        
cufflinks 9.321        
cufflinks 2.278       Low
cufflinks 11.424        
cufflinks 10.681        
cufflinks 15.181     High  
cufflinks 15.243     High  
cufflinks 15.666     High  
cufflinks 3.281       Low
cufflinks 1.589       Low
cufflinks 7.703        
cufflinks 5.342        
cufflinks 9.757        
cufflinks 11.302        

0 Strain