Gene : Sobic.005G197600 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR23155//PTHR23155:SF482 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2082
Name:  ? Sobic.005G197600 Secondary Identifier:  ? PAC:37923633
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G197600 0.5kb upstream 0.5kb upstream 18379 true Chr05: 68255115-68273493 Sorghum bicolor
Sobic.005G197600 0.5kb upstream 0.5kb upstream 500 false Chr05: 68255115-68255614 Sorghum bicolor
Sobic.005G197600 0.5kb downstream 0.5kb downstream 18379 true Chr05: 68255615-68273993 Sorghum bicolor
Sobic.005G197600 0.5kb downstream 0.5kb downstream 500 false Chr05: 68273494-68273993 Sorghum bicolor
Sobic.005G197600 1.0kb upstream 1.0kb upstream 18879 true Chr05: 68254615-68273493 Sorghum bicolor
Sobic.005G197600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 68254615-68255614 Sorghum bicolor
Sobic.005G197600 1.0kb downstream 1.0kb downstream 18879 true Chr05: 68255615-68274493 Sorghum bicolor
Sobic.005G197600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 68273494-68274493 Sorghum bicolor
Sobic.005G197600 2.0kb upstream 2.0kb upstream 19879 true Chr05: 68253615-68273493 Sorghum bicolor
Sobic.005G197600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 68253615-68255614 Sorghum bicolor
Sobic.005G197600 2.0kb downstream 2.0kb downstream 19879 true Chr05: 68255615-68275493 Sorghum bicolor
Sobic.005G197600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 68273494-68275493 Sorghum bicolor
Sobic.005G197600 5.0kb upstream 5.0kb upstream 22879 true Chr05: 68250615-68273493 Sorghum bicolor
Sobic.005G197600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 68250615-68255614 Sorghum bicolor
Sobic.005G197600 5.0kb downstream 5.0kb downstream 22879 true Chr05: 68255615-68278493 Sorghum bicolor
Sobic.005G197600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 68273494-68278493 Sorghum bicolor
Sobic.005G197600 10.0kb upstream 10.0kb upstream 27879 true Chr05: 68245615-68273493 Sorghum bicolor
Sobic.005G197600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 68245615-68255614 Sorghum bicolor
Sobic.005G197600 10.0kb downstream 10.0kb downstream 27879 true Chr05: 68255615-68283493 Sorghum bicolor
Sobic.005G197600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 68273494-68283493 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198798 5267 Panicoideae View MSA
124591134 5269 Grass View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.02     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.017     Low  
cufflinks 0.032     Low High
cufflinks 0.017     Low  
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 0.002     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.006     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low

0 Strain