Gene : Sobic.002G056400 S. bicolor v3.1.1
Defline:  (1 of 2) K10884 - ATP-dependent DNA helicase 2 subunit 1 (XRCC6, KU70, G22P1) Genomic Order:  580
Name:  ? Sobic.002G056400 Secondary Identifier:  ? PAC:37955068
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G056400 0.5kb upstream 0.5kb upstream 13282 true Chr02: 5464659-5477940 Sorghum bicolor
Sobic.002G056400 0.5kb upstream 0.5kb upstream 500 false Chr02: 5464659-5465158 Sorghum bicolor
Sobic.002G056400 0.5kb downstream 0.5kb downstream 13282 true Chr02: 5465159-5478440 Sorghum bicolor
Sobic.002G056400 0.5kb downstream 0.5kb downstream 500 false Chr02: 5477941-5478440 Sorghum bicolor
Sobic.002G056400 1.0kb upstream 1.0kb upstream 13782 true Chr02: 5464159-5477940 Sorghum bicolor
Sobic.002G056400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5464159-5465158 Sorghum bicolor
Sobic.002G056400 1.0kb downstream 1.0kb downstream 13782 true Chr02: 5465159-5478940 Sorghum bicolor
Sobic.002G056400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5477941-5478940 Sorghum bicolor
Sobic.002G056400 2.0kb upstream 2.0kb upstream 14782 true Chr02: 5463159-5477940 Sorghum bicolor
Sobic.002G056400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5463159-5465158 Sorghum bicolor
Sobic.002G056400 2.0kb downstream 2.0kb downstream 14782 true Chr02: 5465159-5479940 Sorghum bicolor
Sobic.002G056400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5477941-5479940 Sorghum bicolor
Sobic.002G056400 5.0kb upstream 5.0kb upstream 17782 true Chr02: 5460159-5477940 Sorghum bicolor
Sobic.002G056400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5460159-5465158 Sorghum bicolor
Sobic.002G056400 5.0kb downstream 5.0kb downstream 17782 true Chr02: 5465159-5482940 Sorghum bicolor
Sobic.002G056400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5477941-5482940 Sorghum bicolor
Sobic.002G056400 10.0kb upstream 10.0kb upstream 22782 true Chr02: 5455159-5477940 Sorghum bicolor
Sobic.002G056400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5455159-5465158 Sorghum bicolor
Sobic.002G056400 10.0kb downstream 10.0kb downstream 22782 true Chr02: 5465159-5487940 Sorghum bicolor
Sobic.002G056400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5477941-5487940 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192321 5267 Panicoideae View MSA
124580278 5269 Grass View MSA
122048334 5273 Angiosperm View MSA
121348405 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.668        
cufflinks 0.229       Low
cufflinks 0.85        
cufflinks 2.011        
cufflinks 4.528       High
cufflinks 1.403        
cufflinks 1.785        
cufflinks 0.404       Low
cufflinks 4.295       High
cufflinks 4.246       High
cufflinks 2.473        
cufflinks 2.602        
cufflinks 1.917        
cufflinks 2.097        
cufflinks 2.275        
cufflinks 0.529       Low
cufflinks 1.775        
cufflinks 2.186        
cufflinks 0.657       Low
cufflinks 1.869        
cufflinks 7.737       High
cufflinks 2.482        
cufflinks 2.703        
cufflinks 2.777        
cufflinks 0.514       Low
cufflinks 0.307       Low
cufflinks 3.058        
cufflinks 1.38        
cufflinks 1.184        
cufflinks 3.616        

0 Strain