Gene : Sobic.002G049700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10217//PTHR10217:SF526 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  510
Name:  ? Sobic.002G049700 Secondary Identifier:  ? PAC:37952972
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G049700 0.5kb upstream 0.5kb upstream 4609 true Chr02: 4703509-4708117 Sorghum bicolor
Sobic.002G049700 0.5kb upstream 0.5kb upstream 500 false Chr02: 4703509-4704008 Sorghum bicolor
Sobic.002G049700 0.5kb downstream 0.5kb downstream 4609 true Chr02: 4704009-4708617 Sorghum bicolor
Sobic.002G049700 0.5kb downstream 0.5kb downstream 500 false Chr02: 4708118-4708617 Sorghum bicolor
Sobic.002G049700 1.0kb upstream 1.0kb upstream 5109 true Chr02: 4703009-4708117 Sorghum bicolor
Sobic.002G049700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4703009-4704008 Sorghum bicolor
Sobic.002G049700 1.0kb downstream 1.0kb downstream 5109 true Chr02: 4704009-4709117 Sorghum bicolor
Sobic.002G049700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4708118-4709117 Sorghum bicolor
Sobic.002G049700 2.0kb upstream 2.0kb upstream 6109 true Chr02: 4702009-4708117 Sorghum bicolor
Sobic.002G049700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4702009-4704008 Sorghum bicolor
Sobic.002G049700 2.0kb downstream 2.0kb downstream 6109 true Chr02: 4704009-4710117 Sorghum bicolor
Sobic.002G049700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4708118-4710117 Sorghum bicolor
Sobic.002G049700 5.0kb upstream 5.0kb upstream 9109 true Chr02: 4699009-4708117 Sorghum bicolor
Sobic.002G049700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4699009-4704008 Sorghum bicolor
Sobic.002G049700 5.0kb downstream 5.0kb downstream 9109 true Chr02: 4704009-4713117 Sorghum bicolor
Sobic.002G049700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4708118-4713117 Sorghum bicolor
Sobic.002G049700 10.0kb upstream 10.0kb upstream 14109 true Chr02: 4694009-4708117 Sorghum bicolor
Sobic.002G049700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4694009-4704008 Sorghum bicolor
Sobic.002G049700 10.0kb downstream 10.0kb downstream 14109 true Chr02: 4704009-4718117 Sorghum bicolor
Sobic.002G049700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4708118-4718117 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993642 5273 Angiosperm View MSA
122183337 5267 Panicoideae View MSA
124580619 5269 Grass View MSA
121263904 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.148        
cufflinks 0.003     Low Low
cufflinks 0.022     Low  
cufflinks 0.178       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.392       High
cufflinks 0.042     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.006       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  

0 Strain