Gene : Sobic.005G204600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Genomic Order:  2152
Name:  ? Sobic.005G204600 Secondary Identifier:  ? PAC:37925477
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G204600 0.5kb upstream 0.5kb upstream 5498 true Chr05: 69030279-69035776 Sorghum bicolor
Sobic.005G204600 0.5kb upstream 0.5kb upstream 500 false Chr05: 69030279-69030778 Sorghum bicolor
Sobic.005G204600 0.5kb downstream 0.5kb downstream 5498 true Chr05: 69030779-69036276 Sorghum bicolor
Sobic.005G204600 0.5kb downstream 0.5kb downstream 500 false Chr05: 69035777-69036276 Sorghum bicolor
Sobic.005G204600 1.0kb upstream 1.0kb upstream 5998 true Chr05: 69029779-69035776 Sorghum bicolor
Sobic.005G204600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 69029779-69030778 Sorghum bicolor
Sobic.005G204600 1.0kb downstream 1.0kb downstream 5998 true Chr05: 69030779-69036776 Sorghum bicolor
Sobic.005G204600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 69035777-69036776 Sorghum bicolor
Sobic.005G204600 2.0kb upstream 2.0kb upstream 6998 true Chr05: 69028779-69035776 Sorghum bicolor
Sobic.005G204600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 69028779-69030778 Sorghum bicolor
Sobic.005G204600 2.0kb downstream 2.0kb downstream 6998 true Chr05: 69030779-69037776 Sorghum bicolor
Sobic.005G204600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 69035777-69037776 Sorghum bicolor
Sobic.005G204600 5.0kb upstream 5.0kb upstream 9998 true Chr05: 69025779-69035776 Sorghum bicolor
Sobic.005G204600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 69025779-69030778 Sorghum bicolor
Sobic.005G204600 5.0kb downstream 5.0kb downstream 9998 true Chr05: 69030779-69040776 Sorghum bicolor
Sobic.005G204600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 69035777-69040776 Sorghum bicolor
Sobic.005G204600 10.0kb upstream 10.0kb upstream 14998 true Chr05: 69020779-69035776 Sorghum bicolor
Sobic.005G204600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 69020779-69030778 Sorghum bicolor
Sobic.005G204600 10.0kb downstream 10.0kb downstream 14998 true Chr05: 69030779-69045776 Sorghum bicolor
Sobic.005G204600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 69035777-69045776 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190582 5267 Panicoideae View MSA
124576557 5269 Grass View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.977       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  

0 Strain