Gene : Sobic.002G044500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12919:SF22 - 30S RIBOSOMAL PROTEIN S16, CHLOROPLASTIC Genomic Order:  458
Name:  ? Sobic.002G044500 Secondary Identifier:  ? PAC:37952365
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G044500 0.5kb upstream 0.5kb upstream 1598 true Chr02: 4211037-4212634 Sorghum bicolor
Sobic.002G044500 0.5kb upstream 0.5kb upstream 500 false Chr02: 4212135-4212634 Sorghum bicolor
Sobic.002G044500 0.5kb downstream 0.5kb downstream 1598 true Chr02: 4210537-4212134 Sorghum bicolor
Sobic.002G044500 0.5kb downstream 0.5kb downstream 500 false Chr02: 4210537-4211036 Sorghum bicolor
Sobic.002G044500 1.0kb upstream 1.0kb upstream 2098 true Chr02: 4211037-4213134 Sorghum bicolor
Sobic.002G044500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4212135-4213134 Sorghum bicolor
Sobic.002G044500 1.0kb downstream 1.0kb downstream 2098 true Chr02: 4210037-4212134 Sorghum bicolor
Sobic.002G044500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4210037-4211036 Sorghum bicolor
Sobic.002G044500 2.0kb upstream 2.0kb upstream 3098 true Chr02: 4211037-4214134 Sorghum bicolor
Sobic.002G044500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4212135-4214134 Sorghum bicolor
Sobic.002G044500 2.0kb downstream 2.0kb downstream 3098 true Chr02: 4209037-4212134 Sorghum bicolor
Sobic.002G044500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4209037-4211036 Sorghum bicolor
Sobic.002G044500 5.0kb upstream 5.0kb upstream 6098 true Chr02: 4211037-4217134 Sorghum bicolor
Sobic.002G044500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4212135-4217134 Sorghum bicolor
Sobic.002G044500 5.0kb downstream 5.0kb downstream 6098 true Chr02: 4206037-4212134 Sorghum bicolor
Sobic.002G044500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4206037-4211036 Sorghum bicolor
Sobic.002G044500 10.0kb upstream 10.0kb upstream 11098 true Chr02: 4211037-4222134 Sorghum bicolor
Sobic.002G044500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4212135-4222134 Sorghum bicolor
Sobic.002G044500 10.0kb downstream 10.0kb downstream 11098 true Chr02: 4201037-4212134 Sorghum bicolor
Sobic.002G044500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4201037-4211036 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029145 5273 Angiosperm View MSA
122189899 5267 Panicoideae View MSA
124568898 5269 Grass View MSA
121298528 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain