Gene : Sobic.002G047500 S. bicolor v3.1.1
Defline:  (1 of 1) K00965 - UDPglucose--hexose-1-phosphate uridylyltransferase (galT, GALT) Genomic Order:  490
Name:  ? Sobic.002G047500 Secondary Identifier:  ? PAC:37949555
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G047500 0.5kb upstream 0.5kb upstream 4487 true Chr02: 4483153-4487639 Sorghum bicolor
Sobic.002G047500 0.5kb upstream 0.5kb upstream 500 false Chr02: 4487140-4487639 Sorghum bicolor
Sobic.002G047500 0.5kb downstream 0.5kb downstream 4487 true Chr02: 4482653-4487139 Sorghum bicolor
Sobic.002G047500 0.5kb downstream 0.5kb downstream 500 false Chr02: 4482653-4483152 Sorghum bicolor
Sobic.002G047500 1.0kb upstream 1.0kb upstream 4987 true Chr02: 4483153-4488139 Sorghum bicolor
Sobic.002G047500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4487140-4488139 Sorghum bicolor
Sobic.002G047500 1.0kb downstream 1.0kb downstream 4987 true Chr02: 4482153-4487139 Sorghum bicolor
Sobic.002G047500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4482153-4483152 Sorghum bicolor
Sobic.002G047500 2.0kb upstream 2.0kb upstream 5987 true Chr02: 4483153-4489139 Sorghum bicolor
Sobic.002G047500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4487140-4489139 Sorghum bicolor
Sobic.002G047500 2.0kb downstream 2.0kb downstream 5987 true Chr02: 4481153-4487139 Sorghum bicolor
Sobic.002G047500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4481153-4483152 Sorghum bicolor
Sobic.002G047500 5.0kb upstream 5.0kb upstream 8987 true Chr02: 4483153-4492139 Sorghum bicolor
Sobic.002G047500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4487140-4492139 Sorghum bicolor
Sobic.002G047500 5.0kb downstream 5.0kb downstream 8987 true Chr02: 4478153-4487139 Sorghum bicolor
Sobic.002G047500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4478153-4483152 Sorghum bicolor
Sobic.002G047500 10.0kb upstream 10.0kb upstream 13987 true Chr02: 4483153-4497139 Sorghum bicolor
Sobic.002G047500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4487140-4497139 Sorghum bicolor
Sobic.002G047500 10.0kb downstream 10.0kb downstream 13987 true Chr02: 4473153-4487139 Sorghum bicolor
Sobic.002G047500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4473153-4483152 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177678 5267 Panicoideae View MSA
124573592 5269 Grass View MSA
122047985 5273 Angiosperm View MSA
121344081 5274 Embryophyte View MSA
123379971 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.489       Low
cufflinks 5.833        
cufflinks 6.627       High
cufflinks 6.98       High
cufflinks 4.831        
cufflinks 6.339       High
cufflinks 5.097        
cufflinks 3.452        
cufflinks 4.442        
cufflinks 4.825        
cufflinks 3.586        
cufflinks 3.809        
cufflinks 4.864        
cufflinks 4.176        
cufflinks 7.731       High
cufflinks 8.224       High
cufflinks 5.308        
cufflinks 5.363        
cufflinks 6.298       High
cufflinks 4.891        
cufflinks 4.938        
cufflinks 4.022        
cufflinks 3.773        
cufflinks 3.651        
cufflinks 4.93        
cufflinks 3.854        
cufflinks 3.134       Low
cufflinks 2.147       Low
cufflinks 4.715        
cufflinks 6.143       High

0 Strain