Gene : Sobic.002G041000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10556//PTHR10556:SF35 - 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE // 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE FAMILY PROTEIN Genomic Order:  421
Name:  ? Sobic.002G041000 Secondary Identifier:  ? PAC:37955440
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G041000 0.5kb upstream 0.5kb upstream 1670 true Chr02: 3949514-3951183 Sorghum bicolor
Sobic.002G041000 0.5kb upstream 0.5kb upstream 500 false Chr02: 3950684-3951183 Sorghum bicolor
Sobic.002G041000 0.5kb downstream 0.5kb downstream 1670 true Chr02: 3949014-3950683 Sorghum bicolor
Sobic.002G041000 0.5kb downstream 0.5kb downstream 500 false Chr02: 3949014-3949513 Sorghum bicolor
Sobic.002G041000 1.0kb upstream 1.0kb upstream 2170 true Chr02: 3949514-3951683 Sorghum bicolor
Sobic.002G041000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3950684-3951683 Sorghum bicolor
Sobic.002G041000 1.0kb downstream 1.0kb downstream 2170 true Chr02: 3948514-3950683 Sorghum bicolor
Sobic.002G041000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3948514-3949513 Sorghum bicolor
Sobic.002G041000 2.0kb upstream 2.0kb upstream 3170 true Chr02: 3949514-3952683 Sorghum bicolor
Sobic.002G041000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3950684-3952683 Sorghum bicolor
Sobic.002G041000 2.0kb downstream 2.0kb downstream 3170 true Chr02: 3947514-3950683 Sorghum bicolor
Sobic.002G041000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3947514-3949513 Sorghum bicolor
Sobic.002G041000 5.0kb upstream 5.0kb upstream 6170 true Chr02: 3949514-3955683 Sorghum bicolor
Sobic.002G041000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3950684-3955683 Sorghum bicolor
Sobic.002G041000 5.0kb downstream 5.0kb downstream 6170 true Chr02: 3944514-3950683 Sorghum bicolor
Sobic.002G041000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3944514-3949513 Sorghum bicolor
Sobic.002G041000 10.0kb upstream 10.0kb upstream 11170 true Chr02: 3949514-3960683 Sorghum bicolor
Sobic.002G041000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3950684-3960683 Sorghum bicolor
Sobic.002G041000 10.0kb downstream 10.0kb downstream 11170 true Chr02: 3939514-3950683 Sorghum bicolor
Sobic.002G041000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3939514-3949513 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195814 5267 Panicoideae View MSA
124574387 5269 Grass View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low  
cufflinks 72.44     High High
cufflinks 29.508     High High
cufflinks 23.28     High High
cufflinks 0.02     Low Low
cufflinks 2.419        
cufflinks 24.411     High High
cufflinks 20.317     High High
cufflinks 0.045     Low  
cufflinks 0.037     Low  
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.064     Low  
cufflinks 3.204        
cufflinks 36.255     High High
cufflinks 15.794     High High
cufflinks 18.112     High High
cufflinks 13.586     High  
cufflinks 17.672     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 0.034     Low  
cufflinks 0.039     Low  
cufflinks 18.359     High High
cufflinks 48.811     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        
cufflinks 3.278        
cufflinks 3.098        

0 Strain