Gene : Sobic.002G042300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23024:SF102 - CARBOXYLESTERASE 15-RELATED Genomic Order:  436
Name:  ? Sobic.002G042300 Secondary Identifier:  ? PAC:37954303
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6303 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G042300 0.5kb upstream 0.5kb upstream 2852 true Chr02: 4036817-4039668 Sorghum bicolor
Sobic.002G042300 0.5kb upstream 0.5kb upstream 500 false Chr02: 4039169-4039668 Sorghum bicolor
Sobic.002G042300 0.5kb downstream 0.5kb downstream 2852 true Chr02: 4036317-4039168 Sorghum bicolor
Sobic.002G042300 0.5kb downstream 0.5kb downstream 500 false Chr02: 4036317-4036816 Sorghum bicolor
Sobic.002G042300 1.0kb upstream 1.0kb upstream 3352 true Chr02: 4036817-4040168 Sorghum bicolor
Sobic.002G042300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4039169-4040168 Sorghum bicolor
Sobic.002G042300 1.0kb downstream 1.0kb downstream 3352 true Chr02: 4035817-4039168 Sorghum bicolor
Sobic.002G042300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4035817-4036816 Sorghum bicolor
Sobic.002G042300 2.0kb upstream 2.0kb upstream 4352 true Chr02: 4036817-4041168 Sorghum bicolor
Sobic.002G042300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4039169-4041168 Sorghum bicolor
Sobic.002G042300 2.0kb downstream 2.0kb downstream 4352 true Chr02: 4034817-4039168 Sorghum bicolor
Sobic.002G042300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4034817-4036816 Sorghum bicolor
Sobic.002G042300 5.0kb upstream 5.0kb upstream 7352 true Chr02: 4036817-4044168 Sorghum bicolor
Sobic.002G042300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4039169-4044168 Sorghum bicolor
Sobic.002G042300 5.0kb downstream 5.0kb downstream 7352 true Chr02: 4031817-4039168 Sorghum bicolor
Sobic.002G042300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4031817-4036816 Sorghum bicolor
Sobic.002G042300 10.0kb upstream 10.0kb upstream 12352 true Chr02: 4036817-4049168 Sorghum bicolor
Sobic.002G042300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4039169-4049168 Sorghum bicolor
Sobic.002G042300 10.0kb downstream 10.0kb downstream 12352 true Chr02: 4026817-4039168 Sorghum bicolor
Sobic.002G042300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4026817-4036816 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181607 5267 Panicoideae View MSA
124582890 5269 Grass View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 0.88        
cufflinks 0.082       Low
cufflinks 0.714        
cufflinks 0.068     Low Low
cufflinks 0.881        
cufflinks 0.514        
cufflinks 1.014        
cufflinks 1.164        
cufflinks 1.167        
cufflinks 1.467        
cufflinks 3.846       High
cufflinks 1.449        
cufflinks 3.11       High
cufflinks 0.465        
cufflinks 0.863        
cufflinks 0.836        
cufflinks 0.513        
cufflinks 0.868        
cufflinks 1.655        
cufflinks 0.076     Low Low
cufflinks 1.326        
cufflinks 1.272        
cufflinks 0.928        
cufflinks 1.482        
cufflinks 1.584        
cufflinks 0.586        
cufflinks 0.69        
cufflinks 0.625        
cufflinks 0.662        

0 Strain