Gene : Sobic.002G034500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  356
Name:  ? Sobic.002G034500 Secondary Identifier:  ? PAC:37951754
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G034500 0.5kb upstream 0.5kb upstream 7011 true Chr02: 3140805-3147815 Sorghum bicolor
Sobic.002G034500 0.5kb upstream 0.5kb upstream 500 false Chr02: 3147316-3147815 Sorghum bicolor
Sobic.002G034500 0.5kb downstream 0.5kb downstream 7011 true Chr02: 3140305-3147315 Sorghum bicolor
Sobic.002G034500 0.5kb downstream 0.5kb downstream 500 false Chr02: 3140305-3140804 Sorghum bicolor
Sobic.002G034500 1.0kb upstream 1.0kb upstream 7511 true Chr02: 3140805-3148315 Sorghum bicolor
Sobic.002G034500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3147316-3148315 Sorghum bicolor
Sobic.002G034500 1.0kb downstream 1.0kb downstream 7511 true Chr02: 3139805-3147315 Sorghum bicolor
Sobic.002G034500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3139805-3140804 Sorghum bicolor
Sobic.002G034500 2.0kb upstream 2.0kb upstream 8511 true Chr02: 3140805-3149315 Sorghum bicolor
Sobic.002G034500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3147316-3149315 Sorghum bicolor
Sobic.002G034500 2.0kb downstream 2.0kb downstream 8511 true Chr02: 3138805-3147315 Sorghum bicolor
Sobic.002G034500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3138805-3140804 Sorghum bicolor
Sobic.002G034500 5.0kb upstream 5.0kb upstream 11511 true Chr02: 3140805-3152315 Sorghum bicolor
Sobic.002G034500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3147316-3152315 Sorghum bicolor
Sobic.002G034500 5.0kb downstream 5.0kb downstream 11511 true Chr02: 3135805-3147315 Sorghum bicolor
Sobic.002G034500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3135805-3140804 Sorghum bicolor
Sobic.002G034500 10.0kb upstream 10.0kb upstream 16511 true Chr02: 3140805-3157315 Sorghum bicolor
Sobic.002G034500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3147316-3157315 Sorghum bicolor
Sobic.002G034500 10.0kb downstream 10.0kb downstream 16511 true Chr02: 3130805-3147315 Sorghum bicolor
Sobic.002G034500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3130805-3140804 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178959 5267 Panicoideae View MSA
124579686 5269 Grass View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.068       Low
cufflinks 214.308     High High
cufflinks 403.995     High High
cufflinks 347.479     High High
cufflinks 26.326     High  
cufflinks 16.604     High  
cufflinks 17.003     High  
cufflinks 136.591     High High
cufflinks 19.449     High  
cufflinks 23.889     High  
cufflinks 20.193     High  
cufflinks 12.097     High  
cufflinks 40.468     High  
cufflinks 8.936       Low
cufflinks 65.233     High  
cufflinks 194.776     High High
cufflinks 15.298     High  
cufflinks 14.988     High  
cufflinks 313.615     High High
cufflinks 29.097     High  
cufflinks 17.293     High  
cufflinks 13.109     High  
cufflinks 8.904       Low
cufflinks 8.34       Low
cufflinks 104.255     High  
cufflinks 128.329     High High
cufflinks 88.639     High  
cufflinks 3.264       Low
cufflinks 57.444     High  
cufflinks 39.119     High  

0 Strain