Gene : Sobic.002G034301 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR32227//PTHR32227:SF51 - FAMILY NOT NAMED // CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  354
Name:  ? Sobic.002G034301 Secondary Identifier:  ? PAC:37950096
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G034301 0.5kb upstream 0.5kb upstream 2284 true Chr02: 3135044-3137327 Sorghum bicolor
Sobic.002G034301 0.5kb upstream 0.5kb upstream 500 false Chr02: 3136828-3137327 Sorghum bicolor
Sobic.002G034301 0.5kb downstream 0.5kb downstream 2284 true Chr02: 3134544-3136827 Sorghum bicolor
Sobic.002G034301 0.5kb downstream 0.5kb downstream 500 false Chr02: 3134544-3135043 Sorghum bicolor
Sobic.002G034301 1.0kb upstream 1.0kb upstream 2784 true Chr02: 3135044-3137827 Sorghum bicolor
Sobic.002G034301 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3136828-3137827 Sorghum bicolor
Sobic.002G034301 1.0kb downstream 1.0kb downstream 2784 true Chr02: 3134044-3136827 Sorghum bicolor
Sobic.002G034301 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3134044-3135043 Sorghum bicolor
Sobic.002G034301 2.0kb upstream 2.0kb upstream 3784 true Chr02: 3135044-3138827 Sorghum bicolor
Sobic.002G034301 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3136828-3138827 Sorghum bicolor
Sobic.002G034301 2.0kb downstream 2.0kb downstream 3784 true Chr02: 3133044-3136827 Sorghum bicolor
Sobic.002G034301 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3133044-3135043 Sorghum bicolor
Sobic.002G034301 5.0kb upstream 5.0kb upstream 6784 true Chr02: 3135044-3141827 Sorghum bicolor
Sobic.002G034301 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3136828-3141827 Sorghum bicolor
Sobic.002G034301 5.0kb downstream 5.0kb downstream 6784 true Chr02: 3130044-3136827 Sorghum bicolor
Sobic.002G034301 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3130044-3135043 Sorghum bicolor
Sobic.002G034301 10.0kb upstream 10.0kb upstream 11784 true Chr02: 3135044-3146827 Sorghum bicolor
Sobic.002G034301 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3136828-3146827 Sorghum bicolor
Sobic.002G034301 10.0kb downstream 10.0kb downstream 11784 true Chr02: 3125044-3136827 Sorghum bicolor
Sobic.002G034301 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3125044-3135043 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196723 5267 Panicoideae View MSA
124581988 5269 Grass View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.369        
cufflinks 0.342        
cufflinks 0.223       Low
cufflinks 0.286       Low
cufflinks 4.058       High
cufflinks 0.455        
cufflinks 1.019        
cufflinks 0.54        
cufflinks 0.626        
cufflinks 0.711        
cufflinks 1.651        
cufflinks 1.91        
cufflinks 0.547        
cufflinks 3.531       High
cufflinks 0.348        
cufflinks 0.106       Low
cufflinks 0.987        
cufflinks 1.002        
cufflinks 0.042     Low Low
cufflinks 0.879        
cufflinks 1.113        
cufflinks 1.358        
cufflinks 2.165       High
cufflinks 2.102       High
cufflinks 0.253       Low
cufflinks 0.241       Low
cufflinks 0.827        
cufflinks 0.951        
cufflinks 0.745        
cufflinks 0.352        

0 Strain