Gene : Sobic.002G030400 S. bicolor v3.1.1
Defline:  (1 of 27) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  314
Name:  ? Sobic.002G030400 Secondary Identifier:  ? PAC:37952575
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G030400 0.5kb upstream 0.5kb upstream 3523 true Chr02: 2792830-2796352 Sorghum bicolor
Sobic.002G030400 0.5kb upstream 0.5kb upstream 500 false Chr02: 2795853-2796352 Sorghum bicolor
Sobic.002G030400 0.5kb downstream 0.5kb downstream 3523 true Chr02: 2792330-2795852 Sorghum bicolor
Sobic.002G030400 0.5kb downstream 0.5kb downstream 500 false Chr02: 2792330-2792829 Sorghum bicolor
Sobic.002G030400 1.0kb upstream 1.0kb upstream 4023 true Chr02: 2792830-2796852 Sorghum bicolor
Sobic.002G030400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2795853-2796852 Sorghum bicolor
Sobic.002G030400 1.0kb downstream 1.0kb downstream 4023 true Chr02: 2791830-2795852 Sorghum bicolor
Sobic.002G030400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2791830-2792829 Sorghum bicolor
Sobic.002G030400 2.0kb upstream 2.0kb upstream 5023 true Chr02: 2792830-2797852 Sorghum bicolor
Sobic.002G030400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2795853-2797852 Sorghum bicolor
Sobic.002G030400 2.0kb downstream 2.0kb downstream 5023 true Chr02: 2790830-2795852 Sorghum bicolor
Sobic.002G030400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2790830-2792829 Sorghum bicolor
Sobic.002G030400 5.0kb upstream 5.0kb upstream 8023 true Chr02: 2792830-2800852 Sorghum bicolor
Sobic.002G030400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2795853-2800852 Sorghum bicolor
Sobic.002G030400 5.0kb downstream 5.0kb downstream 8023 true Chr02: 2787830-2795852 Sorghum bicolor
Sobic.002G030400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2787830-2792829 Sorghum bicolor
Sobic.002G030400 10.0kb upstream 10.0kb upstream 13023 true Chr02: 2792830-2805852 Sorghum bicolor
Sobic.002G030400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2795853-2805852 Sorghum bicolor
Sobic.002G030400 10.0kb downstream 10.0kb downstream 13023 true Chr02: 2782830-2795852 Sorghum bicolor
Sobic.002G030400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2782830-2792829 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199655 5267 Panicoideae View MSA
124585095 5269 Grass View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.837        
cufflinks 0.422       Low
cufflinks 0.736       Low
cufflinks 0.279       Low
cufflinks 3.46        
cufflinks 0.51       Low
cufflinks 2.576        
cufflinks 1.75        
cufflinks 1.128        
cufflinks 1.314        
cufflinks 1.506        
cufflinks 2.823        
cufflinks 1.048        
cufflinks 3.002        
cufflinks 5.96       High
cufflinks 1.118        
cufflinks 3.428        
cufflinks 3.023        
cufflinks 0.684       Low
cufflinks 3.26        
cufflinks 7.842       High
cufflinks 2.804        
cufflinks 3.156        
cufflinks 3.123        
cufflinks 0.459       Low
cufflinks 0.71       Low
cufflinks 1.001        
cufflinks 2.839        
cufflinks 1.626        
cufflinks 4.493       High

0 Strain