Gene : Sobic.002G033300 S. bicolor v3.1.1
Defline:  similar to Os07g0147800 protein Genomic Order:  344
Name:  ? Sobic.002G033300 Secondary Identifier:  ? PAC:37950147
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G033300 0.5kb upstream 0.5kb upstream 5599 true Chr02: 3046128-3051726 Sorghum bicolor
Sobic.002G033300 0.5kb upstream 0.5kb upstream 500 false Chr02: 3051227-3051726 Sorghum bicolor
Sobic.002G033300 0.5kb downstream 0.5kb downstream 5599 true Chr02: 3045628-3051226 Sorghum bicolor
Sobic.002G033300 0.5kb downstream 0.5kb downstream 500 false Chr02: 3045628-3046127 Sorghum bicolor
Sobic.002G033300 1.0kb upstream 1.0kb upstream 6099 true Chr02: 3046128-3052226 Sorghum bicolor
Sobic.002G033300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3051227-3052226 Sorghum bicolor
Sobic.002G033300 1.0kb downstream 1.0kb downstream 6099 true Chr02: 3045128-3051226 Sorghum bicolor
Sobic.002G033300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3045128-3046127 Sorghum bicolor
Sobic.002G033300 2.0kb upstream 2.0kb upstream 7099 true Chr02: 3046128-3053226 Sorghum bicolor
Sobic.002G033300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3051227-3053226 Sorghum bicolor
Sobic.002G033300 2.0kb downstream 2.0kb downstream 7099 true Chr02: 3044128-3051226 Sorghum bicolor
Sobic.002G033300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3044128-3046127 Sorghum bicolor
Sobic.002G033300 5.0kb upstream 5.0kb upstream 10099 true Chr02: 3046128-3056226 Sorghum bicolor
Sobic.002G033300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3051227-3056226 Sorghum bicolor
Sobic.002G033300 5.0kb downstream 5.0kb downstream 10099 true Chr02: 3041128-3051226 Sorghum bicolor
Sobic.002G033300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3041128-3046127 Sorghum bicolor
Sobic.002G033300 10.0kb upstream 10.0kb upstream 15099 true Chr02: 3046128-3061226 Sorghum bicolor
Sobic.002G033300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3051227-3061226 Sorghum bicolor
Sobic.002G033300 10.0kb downstream 10.0kb downstream 15099 true Chr02: 3036128-3051226 Sorghum bicolor
Sobic.002G033300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3036128-3046127 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041414 5273 Angiosperm View MSA
122192385 5267 Panicoideae View MSA
124583158 5269 Grass View MSA
121349870 5274 Embryophyte View MSA
123381480 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.578       Low
cufflinks 3.511       Low
cufflinks 8.645        
cufflinks 11.218       High
cufflinks 8.276        
cufflinks 9.354        
cufflinks 6.833        
cufflinks 3.681       Low
cufflinks 9.675        
cufflinks 9.168        
cufflinks 5.863        
cufflinks 8.121        
cufflinks 7.726        
cufflinks 6.353        
cufflinks 9.107        
cufflinks 6.291        
cufflinks 7.025        
cufflinks 6.802        
cufflinks 6.689        
cufflinks 9.873        
cufflinks 10.191       High
cufflinks 4.996        
cufflinks 6.052        
cufflinks 5.585        
cufflinks 5.459        
cufflinks 2.997       Low
cufflinks 8.13        
cufflinks 0.818       Low
cufflinks 7.345        
cufflinks 12.044     High High

0 Strain