Gene : Sobic.002G004200 S. bicolor v3.1.1
Defline:  (1 of 61) PF04578//PF13968 - Protein of unknown function, DUF594 (DUF594) // Domain of unknown function (DUF4220) (DUF4220) Genomic Order:  42
Name:  ? Sobic.002G004200 Secondary Identifier:  ? PAC:37951967
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G004200 0.5kb upstream 0.5kb upstream 4485 true Chr02: 478705-483189 Sorghum bicolor
Sobic.002G004200 0.5kb upstream 0.5kb upstream 500 false Chr02: 478705-479204 Sorghum bicolor
Sobic.002G004200 0.5kb downstream 0.5kb downstream 4485 true Chr02: 479205-483689 Sorghum bicolor
Sobic.002G004200 0.5kb downstream 0.5kb downstream 500 false Chr02: 483190-483689 Sorghum bicolor
Sobic.002G004200 1.0kb upstream 1.0kb upstream 4985 true Chr02: 478205-483189 Sorghum bicolor
Sobic.002G004200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 478205-479204 Sorghum bicolor
Sobic.002G004200 1.0kb downstream 1.0kb downstream 4985 true Chr02: 479205-484189 Sorghum bicolor
Sobic.002G004200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 483190-484189 Sorghum bicolor
Sobic.002G004200 2.0kb upstream 2.0kb upstream 5985 true Chr02: 477205-483189 Sorghum bicolor
Sobic.002G004200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 477205-479204 Sorghum bicolor
Sobic.002G004200 2.0kb downstream 2.0kb downstream 5985 true Chr02: 479205-485189 Sorghum bicolor
Sobic.002G004200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 483190-485189 Sorghum bicolor
Sobic.002G004200 5.0kb upstream 5.0kb upstream 8985 true Chr02: 474205-483189 Sorghum bicolor
Sobic.002G004200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 474205-479204 Sorghum bicolor
Sobic.002G004200 5.0kb downstream 5.0kb downstream 8985 true Chr02: 479205-488189 Sorghum bicolor
Sobic.002G004200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 483190-488189 Sorghum bicolor
Sobic.002G004200 10.0kb upstream 10.0kb upstream 13985 true Chr02: 469205-483189 Sorghum bicolor
Sobic.002G004200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 469205-479204 Sorghum bicolor
Sobic.002G004200 10.0kb downstream 10.0kb downstream 13985 true Chr02: 479205-493189 Sorghum bicolor
Sobic.002G004200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 483190-493189 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122183787 5267 Panicoideae View MSA
124590626 5269 Grass View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.759        
cufflinks 0.846        
cufflinks 0.072        
cufflinks 0.119        
cufflinks 1.5        
cufflinks 0.005     Low Low
cufflinks 1.764       High
cufflinks 1.227        
cufflinks 0.004     Low Low
cufflinks 0.055     Low  
cufflinks 0.669        
cufflinks 0.543        
cufflinks 0.07     Low  
cufflinks 0.878        
cufflinks 0.039     Low Low
cufflinks 0.912        
cufflinks 1.638       High
cufflinks 1.358        
cufflinks 0.127        
cufflinks 1.267        
cufflinks 0.012     Low Low
cufflinks 0.08     Low  
cufflinks 0.759        
cufflinks 0.655        
cufflinks 0.493        
cufflinks 2.273       High
cufflinks 0.211        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.073        
cufflinks 0.044     Low Low

0 Strain