Gene : Sobic.002G148400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED Genomic Order:  1513
Name:  ? Sobic.002G148400 Secondary Identifier:  ? PAC:37952869
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G148400 0.5kb upstream 0.5kb upstream 41550 true Chr02: 38829811-38871360 Sorghum bicolor
Sobic.002G148400 0.5kb upstream 0.5kb upstream 500 false Chr02: 38829811-38830310 Sorghum bicolor
Sobic.002G148400 0.5kb downstream 0.5kb downstream 41550 true Chr02: 38830311-38871860 Sorghum bicolor
Sobic.002G148400 0.5kb downstream 0.5kb downstream 500 false Chr02: 38871361-38871860 Sorghum bicolor
Sobic.002G148400 1.0kb upstream 1.0kb upstream 42050 true Chr02: 38829311-38871360 Sorghum bicolor
Sobic.002G148400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38829311-38830310 Sorghum bicolor
Sobic.002G148400 1.0kb downstream 1.0kb downstream 42050 true Chr02: 38830311-38872360 Sorghum bicolor
Sobic.002G148400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38871361-38872360 Sorghum bicolor
Sobic.002G148400 2.0kb upstream 2.0kb upstream 43050 true Chr02: 38828311-38871360 Sorghum bicolor
Sobic.002G148400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38828311-38830310 Sorghum bicolor
Sobic.002G148400 2.0kb downstream 2.0kb downstream 43050 true Chr02: 38830311-38873360 Sorghum bicolor
Sobic.002G148400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38871361-38873360 Sorghum bicolor
Sobic.002G148400 5.0kb upstream 5.0kb upstream 46050 true Chr02: 38825311-38871360 Sorghum bicolor
Sobic.002G148400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38825311-38830310 Sorghum bicolor
Sobic.002G148400 5.0kb downstream 5.0kb downstream 46050 true Chr02: 38830311-38876360 Sorghum bicolor
Sobic.002G148400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38871361-38876360 Sorghum bicolor
Sobic.002G148400 10.0kb upstream 10.0kb upstream 51050 true Chr02: 38820311-38871360 Sorghum bicolor
Sobic.002G148400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38820311-38830310 Sorghum bicolor
Sobic.002G148400 10.0kb downstream 10.0kb downstream 51050 true Chr02: 38830311-38881360 Sorghum bicolor
Sobic.002G148400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38871361-38881360 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186858 5267 Panicoideae View MSA
124571087 5269 Grass View MSA
122046345 5273 Angiosperm View MSA
121351412 5274 Embryophyte View MSA
123427373 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194       Low
cufflinks 0.257       Low
cufflinks 0.276        
cufflinks 0.209       Low
cufflinks 0.684       High
cufflinks 0.35        
cufflinks 0.419        
cufflinks 0.301        
cufflinks 0.445        
cufflinks 0.466        
cufflinks 0.533        
cufflinks 0.482        
cufflinks 0.414        
cufflinks 0.332        
cufflinks 0.556        
cufflinks 0.243       Low
cufflinks 0.393        
cufflinks 0.43        
cufflinks 0.297        
cufflinks 0.389        
cufflinks 1.167       High
cufflinks 0.399        
cufflinks 0.442        
cufflinks 0.45        
cufflinks 0.394        
cufflinks 0.251       Low
cufflinks 0.444        
cufflinks 0.238       Low
cufflinks 0.427        
cufflinks 0.699       High

0 Strain