Gene : Sobic.006G056200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12817 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B Genomic Order:  595
Name:  ? Sobic.006G056200 Secondary Identifier:  ? PAC:37946305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G056200 0.5kb upstream 0.5kb upstream 12573 true Chr06: 39982140-39994712 Sorghum bicolor
Sobic.006G056200 0.5kb upstream 0.5kb upstream 500 false Chr06: 39982140-39982639 Sorghum bicolor
Sobic.006G056200 0.5kb downstream 0.5kb downstream 12573 true Chr06: 39982640-39995212 Sorghum bicolor
Sobic.006G056200 0.5kb downstream 0.5kb downstream 500 false Chr06: 39994713-39995212 Sorghum bicolor
Sobic.006G056200 1.0kb upstream 1.0kb upstream 13073 true Chr06: 39981640-39994712 Sorghum bicolor
Sobic.006G056200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39981640-39982639 Sorghum bicolor
Sobic.006G056200 1.0kb downstream 1.0kb downstream 13073 true Chr06: 39982640-39995712 Sorghum bicolor
Sobic.006G056200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39994713-39995712 Sorghum bicolor
Sobic.006G056200 2.0kb upstream 2.0kb upstream 14073 true Chr06: 39980640-39994712 Sorghum bicolor
Sobic.006G056200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39980640-39982639 Sorghum bicolor
Sobic.006G056200 2.0kb downstream 2.0kb downstream 14073 true Chr06: 39982640-39996712 Sorghum bicolor
Sobic.006G056200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39994713-39996712 Sorghum bicolor
Sobic.006G056200 5.0kb upstream 5.0kb upstream 17073 true Chr06: 39977640-39994712 Sorghum bicolor
Sobic.006G056200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39977640-39982639 Sorghum bicolor
Sobic.006G056200 5.0kb downstream 5.0kb downstream 17073 true Chr06: 39982640-39999712 Sorghum bicolor
Sobic.006G056200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39994713-39999712 Sorghum bicolor
Sobic.006G056200 10.0kb upstream 10.0kb upstream 22073 true Chr06: 39972640-39994712 Sorghum bicolor
Sobic.006G056200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39972640-39982639 Sorghum bicolor
Sobic.006G056200 10.0kb downstream 10.0kb downstream 22073 true Chr06: 39982640-40004712 Sorghum bicolor
Sobic.006G056200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39994713-40004712 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194793 5267 Panicoideae View MSA
124569830 5269 Grass View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.169       High
cufflinks 0.352       Low
cufflinks 0.937        
cufflinks 1.753        
cufflinks 1.19        
cufflinks 1.469        
cufflinks 1.164        
cufflinks 0.657       Low
cufflinks 1.94       High
cufflinks 2.023       High
cufflinks 1.332        
cufflinks 1.842        
cufflinks 1.627        
cufflinks 1.696        
cufflinks 1.719        
cufflinks 0.808       Low
cufflinks 1.245        
cufflinks 1.275        
cufflinks 0.818       Low
cufflinks 1.685        
cufflinks 1.45        
cufflinks 1.66        
cufflinks 1.67        
cufflinks 1.736        
cufflinks 0.667       Low
cufflinks 0.375       Low
cufflinks 1.488        
cufflinks 0.515       Low
cufflinks 1.179        
cufflinks 1.719        

0 Strain