Gene : Sobic.002G133000 S. bicolor v3.1.1
Defline:  (1 of 1) 1.3.1.70 - Delta(14)-sterol reductase / Sterol C14-reductase Genomic Order:  1350
Name:  ? Sobic.002G133000 Secondary Identifier:  ? PAC:37952432
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-2541 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G133000 0.5kb upstream 0.5kb upstream 5178 true Chr02: 19062914-19068091 Sorghum bicolor
Sobic.002G133000 0.5kb upstream 0.5kb upstream 500 false Chr02: 19062914-19063413 Sorghum bicolor
Sobic.002G133000 0.5kb downstream 0.5kb downstream 5178 true Chr02: 19063414-19068591 Sorghum bicolor
Sobic.002G133000 0.5kb downstream 0.5kb downstream 500 false Chr02: 19068092-19068591 Sorghum bicolor
Sobic.002G133000 1.0kb upstream 1.0kb upstream 5678 true Chr02: 19062414-19068091 Sorghum bicolor
Sobic.002G133000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19062414-19063413 Sorghum bicolor
Sobic.002G133000 1.0kb downstream 1.0kb downstream 5678 true Chr02: 19063414-19069091 Sorghum bicolor
Sobic.002G133000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19068092-19069091 Sorghum bicolor
Sobic.002G133000 2.0kb upstream 2.0kb upstream 6678 true Chr02: 19061414-19068091 Sorghum bicolor
Sobic.002G133000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 19061414-19063413 Sorghum bicolor
Sobic.002G133000 2.0kb downstream 2.0kb downstream 6678 true Chr02: 19063414-19070091 Sorghum bicolor
Sobic.002G133000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19068092-19070091 Sorghum bicolor
Sobic.002G133000 5.0kb upstream 5.0kb upstream 9678 true Chr02: 19058414-19068091 Sorghum bicolor
Sobic.002G133000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 19058414-19063413 Sorghum bicolor
Sobic.002G133000 5.0kb downstream 5.0kb downstream 9678 true Chr02: 19063414-19073091 Sorghum bicolor
Sobic.002G133000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19068092-19073091 Sorghum bicolor
Sobic.002G133000 10.0kb upstream 10.0kb upstream 14678 true Chr02: 19053414-19068091 Sorghum bicolor
Sobic.002G133000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 19053414-19063413 Sorghum bicolor
Sobic.002G133000 10.0kb downstream 10.0kb downstream 14678 true Chr02: 19063414-19078091 Sorghum bicolor
Sobic.002G133000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19068092-19078091 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177679 5267 Panicoideae View MSA
124575320 5269 Grass View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.941        
cufflinks 0.408       Low
cufflinks 1.892        
cufflinks 2.148        
cufflinks 8.487        
cufflinks 2.122        
cufflinks 5.293        
cufflinks 0.872       Low
cufflinks 3.824        
cufflinks 4.544        
cufflinks 6.822        
cufflinks 6.987        
cufflinks 4.269        
cufflinks 7.155        
cufflinks 4.692        
cufflinks 0.984       Low
cufflinks 5.576        
cufflinks 5.926        
cufflinks 0.934       Low
cufflinks 6.046        
cufflinks 10.99       High
cufflinks 11.495       High
cufflinks 8.146        
cufflinks 8.8        
cufflinks 0.823       Low
cufflinks 0.298       Low
cufflinks 4.613        
cufflinks 1.718        
cufflinks 3.694        
cufflinks 8.129        

0 Strain