Gene : Sobic.002G132600 S. bicolor v3.1.1
Defline:  (1 of 1) K14314 - nuclear pore complex protein Nup210 (NUP210, GP210) Genomic Order:  1346
Name:  ? Sobic.002G132600 Secondary Identifier:  ? PAC:37949562
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G132600 0.5kb upstream 0.5kb upstream 27770 true Chr02: 18920381-18948150 Sorghum bicolor
Sobic.002G132600 0.5kb upstream 0.5kb upstream 500 false Chr02: 18947651-18948150 Sorghum bicolor
Sobic.002G132600 0.5kb downstream 0.5kb downstream 27770 true Chr02: 18919881-18947650 Sorghum bicolor
Sobic.002G132600 0.5kb downstream 0.5kb downstream 500 false Chr02: 18919881-18920380 Sorghum bicolor
Sobic.002G132600 1.0kb upstream 1.0kb upstream 28270 true Chr02: 18920381-18948650 Sorghum bicolor
Sobic.002G132600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 18947651-18948650 Sorghum bicolor
Sobic.002G132600 1.0kb downstream 1.0kb downstream 28270 true Chr02: 18919381-18947650 Sorghum bicolor
Sobic.002G132600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 18919381-18920380 Sorghum bicolor
Sobic.002G132600 2.0kb upstream 2.0kb upstream 29270 true Chr02: 18920381-18949650 Sorghum bicolor
Sobic.002G132600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18947651-18949650 Sorghum bicolor
Sobic.002G132600 2.0kb downstream 2.0kb downstream 29270 true Chr02: 18918381-18947650 Sorghum bicolor
Sobic.002G132600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 18918381-18920380 Sorghum bicolor
Sobic.002G132600 5.0kb upstream 5.0kb upstream 32270 true Chr02: 18920381-18952650 Sorghum bicolor
Sobic.002G132600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18947651-18952650 Sorghum bicolor
Sobic.002G132600 5.0kb downstream 5.0kb downstream 32270 true Chr02: 18915381-18947650 Sorghum bicolor
Sobic.002G132600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 18915381-18920380 Sorghum bicolor
Sobic.002G132600 10.0kb upstream 10.0kb upstream 37270 true Chr02: 18920381-18957650 Sorghum bicolor
Sobic.002G132600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18947651-18957650 Sorghum bicolor
Sobic.002G132600 10.0kb downstream 10.0kb downstream 37270 true Chr02: 18910381-18947650 Sorghum bicolor
Sobic.002G132600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 18910381-18920380 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180966 5267 Panicoideae View MSA
124581601 5269 Grass View MSA
122045642 5273 Angiosperm View MSA
121344134 5274 Embryophyte View MSA
123379983 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.269        
cufflinks 0.194       Low
cufflinks 0.927        
cufflinks 1.005        
cufflinks 12.502       High
cufflinks 1.54        
cufflinks 3.626        
cufflinks 0.349       Low
cufflinks 3.773        
cufflinks 3.787        
cufflinks 5.261        
cufflinks 5.189        
cufflinks 2.908        
cufflinks 3.713        
cufflinks 4.639        
cufflinks 0.41       Low
cufflinks 3.058        
cufflinks 3.616        
cufflinks 0.851        
cufflinks 2.646        
cufflinks 20.008     High High
cufflinks 5.121        
cufflinks 5.274        
cufflinks 5.647        
cufflinks 0.418       Low
cufflinks 0.163       Low
cufflinks 4.411        
cufflinks 2.089        
cufflinks 1.394        
cufflinks 6.56        

0 Strain